FastQCFastQC Report
Wed 11 May 2022
EGAF00003490877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003490877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23738485
Sequences flagged as poor quality0
Sequence length101-151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACC395290.16651862997996714No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG364050.15335856521593522No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA325090.13694639737961373No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA256430.10802290036621967No Hit
TGTTATTCGACTCCTTCAGGTTATCTTGAACTGCCTGACTTAGGCCAGCC250120.10536476948718507No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)