FastQCFastQC Report
Mon 12 Sep 2022
EGAF00003491600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003491600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5756766
Sequences flagged as poor quality0
Sequence length126
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCA119309120.725021652782136No Hit
CCTCTCCCCTGGTGCTGATCATGGGTTTCCAGCCAGGAGAAAGATCGGAA830661.4429281996176326No Hit
CCTCTCCCCTGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA651431.1315902018598638No Hit
CCTCTCCCCTGGTGCTGATCGTGACTGGGTTTCCAGCCAGGAGAAAGATC593211.0304570309093681No Hit
CTCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA406540.706195110240715No Hit
CCTCTCCCCTGGTGCTGATCAGGGTTTCCAGCCAGGAGAAAGATCGGAAG406120.7054655339473587No Hit
CCTCTCCCCTGGTGCTGATCGGAGGTCCTTGGGCAGCATCAGTCAAAGCA376840.6546036437819428No Hit
CCTCTCCCCTGGTGCTGATCGGGTTTCCAGCCAGGAGAAAGATCGGAAGA366250.6362078986708857No Hit
CCGCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCA309180.5370723770950565No Hit
CCTCTCCCCTGGTGCTGACCAGAGGTCCTTGGGCAGCATCAGTCAAAGCA303290.5268409381239397No Hit
CCTCTCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA295100.5126142004034905No Hit
CCTCTCCCCTGGTGCTGATCCAGGGTTTCCAGCCAGGAGAAAGATCGGAA256080.44483308857785775No Hit
CCTCTCCCCTGGTGCTGATCCCCATACCTATTTCACAGTGCTGCCCTCCG234250.4069124921874539No Hit
CCTCTCCCCTGGTGCTGATCCAGTCACGGGTTTCCAGCCAGGAGAAAGAT175980.30569246691632074No Hit
CCTCTCCCCTGGTGCTGATCATTCAGGGTTTCCAGCCAGGAGAAAGATCG149180.25913855105453304No Hit
CCTCTCCCCTGGTGCTGATCCATGGGTTTCCAGCCAGGAGAAAGATCGGA149030.2588779880926201No Hit
CCTCTCCCCTGGTGCTGATCACGGGTTTCCAGCCAGGAGAAAGATCGGAA121720.21143815816032824No Hit
CCTCTCCCCTGGTGTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA116780.20285695128132705No Hit
CCTTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA114630.1991222154939075No Hit
CCTCTCCCCTGGTGCTGATCTGGGTTTCCAGCCAGGAGAAAGATCGGAAG108800.18899500170755593No Hit
CCTCTCCCCTGGTGCTGATCCGGGTTTCCAGCCAGGAGAAAGATCGGAAG107010.18588561702872758No Hit
CCTCTCCCCTGGTGCTGATCATTTGAGGTCAGGAGTTCAAGACCAGCCTG100050.1737954955959648No Hit
CCCCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCA99760.17329174053626636No Hit
CCTCTCCCCTGGTGCTGATCTCCAGCGGAGGGGACCCAACAGCGTCTGGA97980.17019972672156555No Hit
CCTCTCCCCTGGTGCTGATCGGGGTTTCCAGCCAGGAGAAAGATCGGAAG95030.1650753218039434No Hit
CCTCTCCCCTGGTGCTGATCCACGGGTTTCCAGCCAGGAGAAAGATCGGA92160.1600898837993415No Hit
CCTCTCCCCTGGTCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA87110.1513175974149375No Hit
CCTCTCCCCTGGTGCTGATCCAGTCAGGGTTTCCAGCCAGGAGAAAGATC80890.14051291992761214No Hit
CCTCTCCCCTGGTGCTGATCATGGGTTCCAGCCAGGAGAAAGATCGGAAG77090.1339119915591497No Hit
CCTCTCCCCTGGTGCTGATCTCAGAACTCCCTCTTCCAGGAGCATCTAGC75450.13106316984223434No Hit
CCTCTCCCCTGGTGCTGATCGTGGGTTTCCAGCCAGGAGAAAGATCGGAA74610.1296040172555216No Hit
TCTCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCA73770.12814486466880884No Hit
CCTCTCCCCTGGTGCTGATCGTGACGGGTTTCCAGCCAGGAGAAAGATCG73290.12731106319068727No Hit
CCTCTCCCCTGGTGCTGATCACATGGGTTTCCAGCCAGGAGAAAGATCGG72770.1264077782560556No Hit
CCTCTCCCCTGGTGCTGATCTGACTGGGTTTCCAGCCAGGAGAAAGATCG72550.12602561924524985No Hit
CCTCTCCCCTGGTGCTGATCATGGGTTTCAGCCAGGAGAAAGATCGGAAG70530.12251670469148825No Hit
CCTCTCCCCTGGTGCTGATCTCTGCCTCCCAGGTTCAAGCAATTCTCCTG69520.12076224741460743No Hit
CCTCTCCCCTGGTGCTGATCGTGACTGGGTTCCAGCCAGGAGAAAGATCG67770.11772234619228922No Hit
CCTCTCCCCTGGTGCTGATCATTCAACTTTGATGTAGCAGACTGAAGGCT67300.11690591557829517No Hit
CCTCTCCCCTGGTGCTGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTG66380.11530779607856216No Hit
CCTCTCCCCTGGTGCTATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA65980.11461296151346084No Hit
CCTCTCCCCTGGTGCTGATCATGGGGTTCCAGCCAGGAGAAAGATCGGAA63280.10992282819902702No Hit
CCTCTCCCCGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA62740.10898480153614025No Hit
CCTCTCCCCTGGTGCTGATCGTGATGGGTTTCCAGCCAGGAGAAAGATCG61670.10712611907449426No Hit
CCTCTCCCCTGGTGCTGATCGGGAAAAGGGAGGAGCTGAGGATTCAGAAT61590.10698715216147399No Hit
CCTCTCCCCTGGTGCTGATCGGAAGGGTTTCCAGCCAGGAGAAAGATCGG60400.1049200193302976No Hit
CCTCTCCCCTGGTGCTGATCGGAAGAGCACACGGGTTTCCAGCCAGGAGA59900.10405147612392096No Hit
CCTCTCCCCTGGTGCTGATCAGGGTTCCAGCCAGGAGAAAGATCGGAAGA59440.10325241637405445No Hit
CCTCTCCCCTGGTGCTGATCCACTCAAACTTGACCTCTCAAAATGCTGGG59210.10285288649912121No Hit
CCTCTCCCCTGGGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAA58450.10153270082542871No Hit
CCTCTCCCCTGGTGCTGATCAATTTTTCACACTGCTCCAAAATCTTTAAC58090.10090734971683754No Hit
CCTCTCCCCTGGTGCTGATCGTGACTGGGTTTCAGCCAGGAGAAAGATCG58040.10082049539619987No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)