FastQCFastQC Report
Wed 11 May 2022
EGAF00003492792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003492792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11472383
Sequences flagged as poor quality0
Sequence length35-51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3137382.734723901738636No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT282640.24636555456699796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)