FastQCFastQC Report
Tue 14 Feb 2023
EGAF00003599917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003599917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences357479534
Sequences flagged as poor quality0
Sequence length21
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCTGTCTCTTATACACATC27753440.7763644449642815No Hit
CTGTCTCTTATACACATCTCC17811220.4982444673322194No Hit
ATGGGCTGTCTCTTATACACA13300160.37205374671882613No Hit
ATGGGCGCGACCTCAGATCAG9345730.26143398743492824No Hit
ATGGGGCTAAACCTAGCCCCA8906240.24913985705262778No Hit
GTGGGGCTAAACCTAGCCCCA4783080.1338001072811066No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)