FastQCFastQC Report
Tue 13 Sep 2022
EGAF00003599921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003599921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53029114
Sequences flagged as poor quality0
Sequence length21
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCTGTCTCTTATACACATC6004311.1322667016461938No Hit
ATGGGCTGTCTCTTATACACA2732890.5153565266053662No Hit
CTGTCTCTTATACACATCTCC2684880.5063030093242742No Hit
ATGGGCGCGACCTCAGATCAG1995740.37634798122404983No Hit
ATGGGGCTAAACCTAGCCCCA1664600.31390303824423693No Hit
ATGGGGGCGCAATAGATATAG1176660.22188943228431085No Hit
ATGGGGCGCAATAGATATAGT684640.12910643764480018No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)