FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003599943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003599943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77653655
Sequences flagged as poor quality0
Sequence length21
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCTGTCTCTTATACACATC10139201.3056951408146853No Hit
ATGGGCTGTCTCTTATACACA7106970.9152138427998012No Hit
CTGTCTCTTATACACATCTCC5686840.7323338482908499No Hit
ATGGGGGCGCAATAGATATAG1662110.21404143822979096No Hit
ATGGGGCTAAACCTAGCCCCA1479070.1904701072988773No Hit
ATGGGCGCGACCTCAGATCAG1051750.13544114568721846No Hit
ATGGGGCTGTCTCTTATACAC1046100.13471355598136367No Hit
ATGGGGACAACCTTAGCCAAA861140.11089497332739844No Hit
TCCTGTCTCTTATACACATCT859960.110743016539273No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)