Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003600017 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11896362 |
Sequences flagged as poor quality | 0 |
Sequence length | 0-121 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG | 32024 | 0.26919153939666596 | TruSeq Adapter, Index 6 (97% over 35bp) |
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAAACTCGTATG | 27978 | 0.2351811419322983 | TruSeq Adapter, Index 6 (97% over 35bp) |
AGGGTCTGCACATGTTACAATCAAAACCAATGTCTGCTACATTTTCCACT | 22375 | 0.18808270965527107 | No Hit |
GGACTCTGAAATGACTCCTACAATTGAGGGTTGTGTGAAAGATGTTTCAT | 13532 | 0.11374906042704484 | No Hit |
ACAGATCACTAAAGTGGTTCTTAGCAAAGGTTGGAGGTGTCTTGAGTGCA | 11897 | 0.10000536298407867 | No Hit |