FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003618012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003618012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66
Sequences flagged as poor quality0
Sequence length71
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTTACAGCTGCAATTAAAATATGGGTATATAACCAAGTGGGAACATGAACCGCATACTTTTTATTTTG23.0303030303030303No Hit
CTGTTATGGGAGCAGGGGAAAAAGGACAAAGGGAGGACGAATTTCTAGCGGACTATTTGTCCTCTCCGCTT11.5151515151515151No Hit
GCACTCTGTAAAAACGGACCAATGAGCAGTCTGTAAAATCTGTCTCTTATACACATCTCCGAGCCCACGAG11.5151515151515151No Hit
GCGGTGGGCGAGGGAGAGATTTTTAATTTGGAACGCGGGTTTTTCCTTGAGCTCACTGATCCCGAGGAGAT11.5151515151515151No Hit
CCCGGCAAGAGCGCCGGCATTGCCTCGGCACGGGCTGGGGCTTGCGCCTCGGCTCATGCCGCGCCCTGGGG11.5151515151515151No Hit
CCGTAAGGAGCCGAAACAAATTAGTTTTCGTGTGAGCGAATTCGAATATTTAAAGTTAAAGTCGACTACTT11.5151515151515151No Hit
GGTTTCACCGTGCGCCCAGTGGCAAGGCATTTAAGCAACCCGGTGCTGGGTATCCCCGTTTTACTGGGCCT11.5151515151515151No Hit
GGTCAAGTGGTTCGATCTCCACGCATCGTGGACCTACCAGGACTCGCGCTTTTCCGACTTCGTCTACACCA11.5151515151515151No Hit
CCGGCGTAATCGCCCCACCATCGCCGATCCGCGCACCCCCGCCGAGCGACGCGCGAAGTACCGTCGCCAGG11.5151515151515151No Hit
ATTGTGCGTAACGGCGGTGTTGTCATTCAGCAGGAGAGCGATCGCTACATTATGACGTCGGGCCGCCTGCA11.5151515151515151No Hit
GGATATTCTTTCCAAGCCCAGACTAGATGCTTGGTGACTTATAGATTTCCACTTGCGATTCTGCAAATTTG11.5151515151515151No Hit
GAACGGGCCGGTGCCGATGACGACCGAGCGGCCCCACTCCGCCCCGGCGTCGATCACCTCCTGCCGGGGGG11.5151515151515151No Hit
GGCTGAAGTGGTGCAGCACACCCTGGTGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTTGTCTG11.5151515151515151No Hit
GCCCGGACCCACGCCCGAGCATCCACTGCACTGCCCGGCCGAGGCCGCGCTGGTCGACGACTTTGCACTGC11.5151515151515151No Hit
GCGCCTTGATGTTCTCGCGGGCGATGATGTTGGCGCCGATGGCCGCCTGGATAGCGACGTCGTACATCTGG11.5151515151515151No Hit
ATTACGTGGGCCCGGTGGACCCGGTGGCCGGCGAGGCCGTCGGCCCGGCCGGCCCGACCACCGCGACCCGC11.5151515151515151No Hit
GTGGAGCGTTTTGCGCACCGCGAGCTGACGCTGCGTGACGTGGCCCGCCTGGTGGGCGAAGCTGCGCGTAT11.5151515151515151No Hit
CTGGTATTCTCGGCATTGTCGCCTGGCTTCTCTTCTTTGGTATATATCTGTCTCTTATACACATCTCCGAG11.5151515151515151No Hit
GCCATTCGTTGGCCACCGAGTCCGAGGCATCCACGCGCCGCGCGCCGCCGATCAGCCCCAGCGGCAGCTTG11.5151515151515151No Hit
GCCTTCGCACAGCGAGACCGTCAGAATCTATACGTTTTCGGAGCTGGAACGCTTTGACCTCTGAGTTTGTC11.5151515151515151No Hit
CATCCGGCTTTTCCGGATAATCAAAGCGCGCTGGTGTGAAGCTCCATCTCCGGCCATCGGTCGAGCTTCCC11.5151515151515151No Hit
CATTGGGTCAAGAACAAGATCATTCTCATTACTCCATGTTTTGATATGATCTATAGCTAGATTATAATGCA11.5151515151515151No Hit
CCCTTCACGGGTGCGGGTGTTGAGCGCGCCGTTGCGGAACCCGCTGAAAGTCTGCTTGCCCGAGTAGTAGC11.5151515151515151No Hit
GTCCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGATCACCT11.5151515151515151No Hit
CCGAATGCGTCACCGGCTCGAACACGATCACGAACTGGTTGGGGATCTGCAGCGACAGCACCGCCTTTTCG11.5151515151515151No Hit
CTTTGGGAACGCTTCTCTGGGAGTTCCTTCCCTTCAAGGAACAGCCTTCCAGACCGAACCTTCACCATGCC11.5151515151515151No Hit
CGGCTGAACCTACCAGAACTCCCACCAGCGAACTCGCGCTCTGGCCAGTTGGCTGCACCACTACAACTGTC11.5151515151515151No Hit
CCTGCACACCGCGCGCTTCCTCTACCGCGGACAGACCGCGGCGGTGCAGGTTCTCGGCCAGCATCGCGCCG11.5151515151515151No Hit
GTTCAGGCTACCGCCTTTCCGTGCGTCGGCGCCAAATCCGCGCTTGGTCGCGGGCAAATGGACATCGTCGT11.5151515151515151No Hit
CCGCCACGCATTGGGCCTGCGCAGGCTCGGCGCCTTCCACTTCGTCGACAATCCAGCCTCGGGCCGCGTGC11.5151515151515151No Hit
ACCTACAGGCGTGTGGCGTTTCGCCAAATCAAGCAAATATGATGAATGGATTTGTTTATTTATCTCAAATT11.5151515151515151No Hit
TTCAAATCCTTCCGGGCGCGGGGGGGGGGGGGTTTAAGAAGGAGGGTGTTGGTGGTTGGTGTTTTTTTTTT11.5151515151515151No Hit
GTGTAGGAATTTTTCAGAAGAGACAAAAAGATTTTCCGACAAGTTGAATGATTCAAACTTAAAGATATTTT11.5151515151515151No Hit
GGATTACCGATACGGATTGCTGTAGCGATTGTTTCAGGATTTTTAATGACTTTATTTTGAACAATTGGTGA11.5151515151515151No Hit
CGCTCCACCAGCTGCGCCTGGCATACGTCGAGTTGACAAAGACGGAGAACGGTTGATCCCCCGCGGGCCGG11.5151515151515151No Hit
CGCATGTGATGGGTCGGATCGTGGTGGTCTTCGGCGCAGGGGGCGACCGGGACCGGACGAAACGGCCGCTG11.5151515151515151No Hit
ACCCAGTCCTAGTTTCGGGAGCACCTAACCAGGTATCTACCCCACACAAATTCAACACCGTTTTCGATCGA11.5151515151515151No Hit
CACTGCGGCCGCGCCGTCCCGACGGCCCAATCTCACCCCATCGTTCAGGAGCTCGCATGCACAAGATCGCC11.5151515151515151No Hit
GAGAAGCTGGGCAAGCTGCTCGAGAAGAACCACTGGGATCTCATCGTCGTCGACACCCCGCCGTCGCGGAA11.5151515151515151No Hit
ATAGCGACCCGTCAGTCGTCTATATTCCTTTTGAAAGTTTCTGGCAGGAACAAGAGCCCTGCAATGACGGT11.5151515151515151No Hit
GTCAGGGACCGGATCACGCCGCGCTGCGCGCGCTGGGCGACTCGCTCGGCCTTGGCGCGCGGCTGGTGCTG11.5151515151515151No Hit
TCCAATATGTCCACCCCATGTAGAACCCTGCGCCGGGGCCAACGAGGTCTGTTGCGAAGTCGGCGAAAGAC11.5151515151515151No Hit
ACCAAGGGTTTGATTTCATCGGGGCCCTGAAATTCAAGCTGCTTGATTTCGCCTTGTTGCAAACGGGCCAA11.5151515151515151No Hit
CTTGAGGCCCAGAGTTGAAGACCAGTCTGGGCAACACAGCAAGACTCTGTCTCTACAAAAGATGAAAATAT11.5151515151515151No Hit
AAGGTGAATGAGGAAATTTCACGCTCGCTGACCGATGCCCTGGTGCGTGGCTTCGAAAGTGGTAAATCCCT11.5151515151515151No Hit
TATTTGACGATTATGTTATTTTGACCCAACAACAAAATCAAAACTATAAAATCGTTCAACAATTTAATCAC11.5151515151515151No Hit
GTGCCGCAGGCCTCGCCGCGCTGCTCCAGCATCCCGAGCGGTTCAAGGGCCGCACCGTCGGCATCGTGCTG11.5151515151515151No Hit
GCGTTGGACACCTCGGTCACGGTCGGGGCGTATTCCTCAGGTGTCTTGTGGCCCATCTGCCACGGCCCGTC11.5151515151515151No Hit
GAAGAGGAAGGGCAAGAACTGGCTCTGCAAGTGCCCGTTCCACGACGACCAGACGGCTTCTCTGAGCGTCC11.5151515151515151No Hit
CCGCGCAGCTGGCCGCAGCACAGCCGCAGTCAGCCCCGCAGCCGGCTGTGGATCTGTCTCTTATACACATC11.5151515151515151No Hit
GTGCTGGATGGCGAAGGCAAACCAATCGCGCAATTGAATCGCGCCGGAATCAACGAATTGATGGCCAGCGG11.5151515151515151No Hit
CATGGCCTCACCGGAGGCTCAGGATGCGCTGTGGTTGAGCGTGCGCACCTGTGTGATTGCCACGGTCATCG11.5151515151515151No Hit
CCTAAAAACGTTGTGTAAGACCCAGAGAGAAAAACTCTGCATCCAAGTCTGCAATGCCCTTAAATTAGCAA11.5151515151515151No Hit
ATCAGAAACTCGCCCACTCTCCGCATCCTTCAAAGTGATGTTAAAAGACTCAGAAACTGACAACATCCAAT11.5151515151515151No Hit
CTATCAGCACGGCAATCACTACAGCAAATACAGCTTCCATCAGCGGTCATCCTCCGTGAGTTCGTCTGGGG11.5151515151515151No Hit
ATTCTTGGTAGCTCCGTTTTCTATTCGATATTTTTCAAAGCCAGCGCGGCTGAGGTTACTTACAACATTTA11.5151515151515151No Hit
CTACAGTGACGGGTTTCGCTGCTTCATCGTGGGCCTGGTGGAGCCAGGCCAGCTGGCTGAGGGCTTCAGCC11.5151515151515151No Hit
GCTTCATCGTGCAACTGCCGAGCGGGAAGAAGCCGAGATCGATGCCGTAATTCTGGCGCGACAGGCGCGTG11.5151515151515151No Hit
CTTGTCATTAGCGAGGACGAGGTAATTCGGACGGTCATGCTCAAGAATACCGTGGACGGCGAATTTACGAC11.5151515151515151No Hit
GGGTATTATGTGAACGTCGTCTCGAAGGTGTTGCAAGGAGGGCCGCTCGATGGGAGCGACAAATTCAGTTT11.5151515151515151No Hit
ATTGGTATTTGCCCTGCCTGGCCAACAGTTCTTGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTT11.5151515151515151No Hit
GCTTCTGTCTAGTTTTTATTTGAAGATGTTTCCTTTTTCACCATAGGCCTGAAAGCGCTCGAAATGTCCAC11.5151515151515151No Hit
GCCCTGGAAAGGCACGCAGGCGAAGAAGTGGCTGGGCACCACCTGGATGCCGCATTCGGGCCTGACCAAGG11.5151515151515151No Hit
GGGAAAATATCCTGAGGTCTGGATGAGAGCAGGCACCTGCAACTGCTGTCTCTTATACACATCTCCGAGCC11.5151515151515151No Hit
GGCCTACGTCCCGCGACCGTTTGCAGCACCATCAGCGCTGGATGCTGCCCGGGGTTGGACTACGACGCCAA11.5151515151515151No Hit

[WARN]Adapter Content

Adapter graph