FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003618013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003618013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66
Sequences flagged as poor quality0
Sequence length71
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTGTAATTATTGGTACCACGCTTGATGCCTTCAAAATAAAAAGTATGCGGTTCATGTTCCCACTTGGTT23.0303030303030303No Hit
GAAGTGGACATTTCGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAACATCTTCAAATAAAAACTAGACAGA11.5151515151515151No Hit
CTGTGACCATTTCAACAGCTTGATCAGGAGTCATATTCATACCCTTTTGACTTGCTATTTGCATCGCTTGC11.5151515151515151No Hit
CCATATCGTAATTCTCAACAAGAGAAACGGATAGCTGATGAGAAAGTGATTGGAAATATATGGGGCTATTG11.5151515151515151No Hit
GTTTTTGAGGTAATCGCCAAACGACTGAGCCAGGGATTTACCACTTTCGAAGCCACGCACCAGGGCATCGG11.5151515151515151No Hit
GATGAAGCATTAGAAATCGTTAAAGAGATTGCACAAAATGATGATGATATTGAATTAGTAAATTCTGTTAA11.5151515151515151No Hit
CTTGTTTTCTGAAAAATCATCCCAAAGACGCTGTTCCGGGAACTGCTCAATCAGGCGGGCGAGGGCTTCAA11.5151515151515151No Hit
GTTGGTCGGGTTGATGATACCCTGGTAGGTCAGCAGTGCAAAGTCGTCGACCAGCGCGGCCTCGGCCGGGC11.5151515151515151No Hit
CGGCATGGGTGCACATCGGTCTTCGAGGTCGAGTTCGAGCAGCACCGCGGGCGCCTCGCCACCGCGACCGA11.5151515151515151No Hit
CGCCGCCAATACGCGCAGCTTCGCCCACCAGGCGGGCCACGTCACGCAGCGTCAGCTCGCGGTGCGCAAAA11.5151515151515151No Hit
CCCCCGGCCTCGCACGAGAAACAGTTCCAGAGCTGGCCCTGGACGCTCAGAGAAGCCGTCTGGTCGTCGTG11.5151515151515151No Hit
GAATGGGCCAGCGCCATGCTGTTTGACCTAGGCGTATTCCTGACGGTGCTGGGCGGCGCCATGACCATCAC11.5151515151515151No Hit
TCCATCGCCGGTGCGCAGGAGAAGACGGCGCTGCTGCAGTGGCAGGGCAGGTGGTGTCGGCCGCACGGCGT11.5151515151515151No Hit
CTGCATGGGAACCTCCTCGTGACGATAGCGCCCCGGTCTAGCACGGGAATGCTAGCGCCGCGACAGGGCCA11.5151515151515151No Hit
GAATATAACCGCCAGATGTTCTGGAGCTCGGGGATGGAGCTCAACGAGGCATCGGTCAACCGGCTGATCGA11.5151515151515151No Hit
ATACGATCGAGGTCACGCTCAAGACGCCGCAGGCGGTCTTCCCCGCCATCCTCTCCATGACCATGAACGGC11.5151515151515151No Hit
NAGTTTGTTTTCCATTGAAATCCCTGTGGAGCCTTTATTGATTGATTGTGGTTCCAAGTTGTTCGCCGTGT11.5151515151515151No Hit
CCAAGAACTGTTGGCCAGGCAGGGCAAATACCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCA11.5151515151515151No Hit
CCATTAACCAATGCTTTGTATTATATTTATTCATGAATGGTAATTTAGCAATCATCACACATTTAATACCA11.5151515151515151No Hit
GCTTCCGGCCACCTCACTGCATCGCCCATCCGTGGCTTACGACAATTGACTGGCCAGTCAGAGCGTTGGTT11.5151515151515151No Hit
CTTCATCAGGCGGCCGGACAGGAACGAGCCCAGGCTCTGCGGGGCGTCGAGGAAGTCGAGCGCGTTCCGCG11.5151515151515151No Hit
CCGCTACACTTCGATGTCGCTCCCCTATCATATCGGCAATGGCTGGTTTGGTGGCTTCCTGCCCACAACCG11.5151515151515151No Hit
AATGAACCTAGTCTGCACGACAACCTCCGTAAATATTTTGCCAAAAAATTGCATGATTTCGATCGTAGTTT11.5151515151515151No Hit
GAGTATCGGGCTACGAACCAGAGGGTCGGAGGTTCAAATCCTTCCGGGCGCGGGGGGGGGGGGGAAAAAAA11.5151515151515151No Hit
CGCTGGTGATAGACCTCGATGATGTTGACGCGTTCCTGGTCGAAGATCCGCGCGACGTTGTAGAGTGCCCC11.5151515151515151No Hit
GCACCAGGGTGTGCTGCACCACTTCAGCCCTGTCTCTTATACACATCTGACGCTGCCGACGACCACGCCGA11.5151515151515151No Hit
GTGGTGCCTCGGTTTCGCTGTTCGAGACATACACCCAACCGCCATCTTCGGTCGGGAAGACTGCGCCACCA11.5151515151515151No Hit
ATCCACAGCCGGCTGCGGGGCTGACTGCGGCTGTGCTGCGGCCAGCTGCGCGGCTGTCTCTTATACACATC11.5151515151515151No Hit
CTTGCCGATCATCGCAATCAGTCCGGTCTCGGCCAGCATCATCTCGGTGAAACCGTCCATGCGGGTCGCGG11.5151515151515151No Hit
CCGCAGACCCGAGCGAAAGCGGCGGTCCTTACAAGTCCGCTCCTCGGGGAGCTTGATTGATAATTCTGTAT11.5151515151515151No Hit
CCTCGACCCTGACCAGGAACGACGTTGCCCGGCGCGATCGATACGTCGAGCACCTCGGAAGGCCCGGAACG11.5151515151515151No Hit
GTCCCAGGCCGAGCGCACATCGCGGGCGACGACGATGTCCATTTGCCCGCGACCAAGCGCGGATTTGGCGC11.5151515151515151No Hit
ACCGAGCAGATCGCGGCCTATGTGCTCGGCTACTACTCGGGCAAGCAGACTTTCAGCGGGTTCCGCAACGG11.5151515151515151No Hit
TGGCACCCTATGTGGGAAGCTCGACCGATGGCCGGAGATGGAGCTTCACACCAGCGCGCTTTGATTATCCG11.5151515151515151No Hit
AACGACGGCAGGTCGGTTTTCTCTGGCGGTCTCGATGGAAGGATCGCAGTTTACAGGCAGTCGATTCAGCA11.5151515151515151No Hit
GTCCTTGACCATGTGGATCTCGACTTCCCAATCGGGACAACAGCCGTGGTTGGACCAAGTGGCAGTGGAAA11.5151515151515151No Hit
GTTCGCGCGTGCAAAAACTTCCGCAACCGAAAATCGCCGGCCCGCGGGGGATCAACCGTTCTCCGTCTTTG11.5151515151515151No Hit
ATATATACCAAAGAAGAGAAGCCAGGCGACAATGCCGAGAATACCAGCTGTCTCTTATACACATCTGACGC11.5151515151515151No Hit
AAAGAAAACATAAGGAGTTAGTAGAGAATGGCCTATAAACATCTTAATACGGATGAACTCACGTTCATAGA11.5151515151515151No Hit
CCTTGAGAGTGCCTCGGGGGACGTTGCAGGCCTGGGATAGTTCATCCAGGCTGAAGCCCTCAGCCAGCTGG11.5151515151515151No Hit
ATGATCTTCAGCGGGGGTTCAGCAATGTCGGGGGAACGACGTGTGAAGCGGGCTTTGCACCTCTCTTTATA11.5151515151515151No Hit
ATTTTACAGACTGCTCATTGGTCCGTTTTTACAGAGTGCCTGTCTCTTATACACATCTGACGCTGCCGACG11.5151515151515151No Hit
ATGCAGTGCAAGCAGCCTTGGCCCGTTTGCAACAAGGCGAAATCAAGCAGCTTGAATTTCAGGGCCCCGAT11.5151515151515151No Hit
CTCACGCCGGGCGCAGCCCGAAGGCCGCAAGGCCCCAGGGCGCGGCATGAGCCGAGGCGCAAGCCCCAGCC11.5151515151515151No Hit
GACCAAGGTCGGCACCACGCGCTAAGGCTACTGGTTCCACCGCACCGCGACCGCATGCGCGATCGCGGTGC11.5151515151515151No Hit
GGCAGTCGCCCCGCTGTGGTCGGCACCACGTCGCCCGTATGCAGGCGGCCCGACGTCATAATGTAGCGATC11.5151515151515151No Hit
GTGGTAGAGACCTTTTTCCAATCAATTATTTTGAGTCAAATGAATTTGCATTGTACCATCCGTTGAATTCT11.5151515151515151No Hit
AGCTGAACTTTTGCAGCAATTTCCGGCCATTTCGGCGGCCGAGAAGTCGAAGCGCGGACGACCACCGGAGA11.5151515151515151No Hit
CCCCTATCATGCCGCGTCTACCAAATGTCGCCAATAAGGCCAAACCGGCGACCACCGGCGGTAGCGACAGC11.5151515151515151No Hit
ATGCTGACGGGGGCCGAGGTCGAGGCGCAGCCGGCCAGGACCAGGGCGGCGGTCGCGATCAGCGGGGCGAT11.5151515151515151No Hit
CAAGAAGCATCTTGTGTTCAGCAAATCAAGCCAAATCTTACAGAATTTGAGATAAATAAACAAATCCATTC11.5151515151515151No Hit
CCGTGATCCCACACGCTGCCGCCGACGGGACGCCGGGCCATCAGCTGGTGGCCGGTCACCGCCGGGCTGCC11.5151515151515151No Hit
ATACATTGCATGGACCTCAGAAGAGGTTCAACTCCTGAAAGACAACTATCAAACCGCCTCACAACACTATC11.5151515151515151No Hit
TCCCGCGCCAGATGTACGACGTCGCTATCCAGGCGGCCATCGGCGCCAACATCATCGCCCGCGAGAACATC11.5151515151515151No Hit
GTTTTGCACAACCCGAATGATTGGATGTTGTCAGTTTCTGAGTCTTTTAACATCACTTTGAAGGATGCGGA11.5151515151515151No Hit
CGTCCGCCTGCACCCGCAGCCTGTCGCCGAACAGCGTGACGCCTGGGGTGATGCGGAAGGTGTTTTCGGGG11.5151515151515151No Hit
GCAGGCCTCCAGGATGGCGCGGCGAATGCTGGCCGGATCCTCTGTTCTCGGGTTGTCGTCGGTGACATAAA11.5151515151515151No Hit
TTGTAGTGGTGCAGCCAACTGGCCAGAGCGCGAGTTCGCTGGTGGGAGTTCTGGTAGGTTCAGCCGCTGTC11.5151515151515151No Hit
TGTCGGAGGCGACGGTACCGGTGGTGACGCGTGCATCGCCGCAGACGCGGATGCTGATCGTCGCGGGCGCG11.5151515151515151No Hit
CAGTTGCAGGTGCCTGCTCTCATCCAGACCTCAGGATATTTTCCCCTGTCTCTTATACACATCTGACGCTG11.5151515151515151No Hit
TAGCTATCGTTGGCGTCGTAGTCCAACCCCGGGCAGCATCCAGCGCTGATGGTGCTGCAAACGGTCGCGGG11.5151515151515151No Hit
GTTGGGAATAACAATAAGGTGACTCCAGTAGAAGTGTCCTGTGGAGAAATTAAGGGCATTGCAGACTAGGA11.5151515151515151No Hit
CTCCCTAGCGGGTCCGTCTATTTTGCTGGTTTACCTCATCATCGGAGCAGTACTCTTCTTCGTCATGCGGG11.5151515151515151No Hit
GGCAGTCCTCCTGCCTCAGCCTTCCAAGTAGCCAGGACTCCAGGCACACACCATCTTGCCCAGTTGATATT11.5151515151515151No Hit
CCCGGGAGAGGGCCGGGGTGAGGGGCAGCCCAGCAATGCTGCGCCCGGAACGGCCCCTCACCCAACCCTCT11.5151515151515151No Hit

[WARN]Adapter Content

Adapter graph