FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003618314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003618314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length71
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAAATTACAGGCATCCACCTGTCTCTTATACACATCTCCGAG14.3478260869565215No Hit
GTATACCCTTTATCATTCGGTGTCCTTGTACTCAGACTTTCATGTCCCTGGGTGACCTCAATGTGTTCTGT14.3478260869565215No Hit
GGATGGGAAGTCCATCACATGGACGTAAAATCAGCTTTTCTGAACGGAGATCTCACGGAGGAGGTATATGT14.3478260869565215No Hit
GATCCATTCGGCGGCCCAGGTGCGGTAGCCCTCGCGGTCGATGCGTGCCAGTGGCTGGAAGGCGATTTCGC14.3478260869565215No Hit
GTCGGTGCCGGCCAAGGACGTCTACATCCGCGCCGGCGCCAGCAGCCTGCCGTATGCCGAGTTCCAGCGCT14.3478260869565215No Hit
TACGAAATGCGATTAGCTGTCTCCGCGGAAACCGAAGAGGGCGCGCGCCTTAACGAGTCTCGCATCAAGCA14.3478260869565215No Hit
GATCGAACGCGGCCTTTCGCATTGATGGCTGGCGGGTGGCATCCATAGCGCGAGCTTATCCGCCACAGGTC14.3478260869565215No Hit
TCTGTTCTCGGTGCCGCGCAAGGATGCCGAGAAGCTGTACCTGATCCCCACTGCCGAGGTTCCGGTCACCA14.3478260869565215No Hit
GGCTAGACTTCTGCGTTTTGCCATATCTTCCAATTGATCAGTGCCGATTTTATCTACACTGAAATATTTGG14.3478260869565215No Hit
GGTTTACACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTGCAAGTGGAGATTTCAGTCGCTTTGAGG14.3478260869565215No Hit
GCGTAGGGACGTCTTCTAACTGGTTCGGTCAACTGCCCACCCTCCTCATAGCCGACATAACCAGGAGGAGC14.3478260869565215No Hit
GCTATGCCTTACCGGGTGTGGTGCTTGCAGTAGGAATCTACATACCGATTGCGTGGCTGGACAATGCTCTA14.3478260869565215No Hit
CCCCTGGGCGGCGCGGGCGGCGGCCTGGACCGCGAATGACATGGCGCCCACGAACACCGGCAGGCCGGACT14.3478260869565215No Hit
AATAGTCGCATCTCCTAAACCCACTTATTATGATTACGGTTAGGATTCTGTCTCTTATACACATCTCCGAG14.3478260869565215No Hit
AGCCCCAGCTGCGTATCCGTAAGGACGAGATCCGCCTTGATCCGCTCGAGCAGGATCGCAAGGATCTGCCG14.3478260869565215No Hit
GCCCTGGAAAGGCACGCAGGCGAAGAAGTGGCTGGGCACCACCTGGATGCCGCATTCGGGCCTGACCAAGG14.3478260869565215No Hit
CGCTTCGGCGGCGTGCGGATAGCCGGACAGGATGAACGCCTCGATCCCCATGCCCTGATACATGCTCAGCT14.3478260869565215No Hit
CAGTCGGGCGATGAACTCGATCTTCTGGTCGGTCTCCAGCAGGACCTTTTCGTTCTGCAGTCCGTCCCGAG14.3478260869565215No Hit
CCATTGTCGGCGACCGCCCGCTTGTCGATCGCGGTTGAGGCGGTGGAACTGGACGCGCTCGACTTCGAACC14.3478260869565215No Hit
GCAGCGCAAGCCGCGCCGCGATCGGCATCTTCTGGTGTCGTAGCGTCATGTCCCCGCTTATCGCGTTTTGG14.3478260869565215No Hit
TGAACTGGTAGATCTTCACCGGCTTGCCGCGGCCGTGGGCGCGCAGCGCCAGGCCGAAGGCCGCGGTGCTC14.3478260869565215No Hit
TCGTAACGGCGACCAGGCCCGATTCCTCCCGAATGACGTTATCGCCAACACACGTTCCAACGGCGACCCCA14.3478260869565215No Hit
TCATCACAGGGCTCCATCCTACCGGCAGCAGCATCAACTGCACCTGTCTCTTATACACATCTCCGAGCCCA14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)