FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003618315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003618315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length71
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCAGTTGATGCTGCTGCCGGTAGGATGGAGCCCTGTGATGACTGTCTCTTATACACATCTGACGCTGCC14.3478260869565215No Hit
GGGTCCAACGGGTGTCGGAAAGACAGAACTTTCTCGTGCACTCGCCGAAGTGTTGTTTGATAACGAGGAAG14.3478260869565215No Hit
CTGTACGACGCCGCCAGCGGCGCCACGCTGGTGCAGGGCAAGTCCGGCCTGCCGGTGTTCGTGGGCGCCAT14.3478260869565215No Hit
GAGCAACATATACCTCCTCCGTGAGATCTCCGTTCAGAAAAGCTGATTTTACGTCCATGTGATGGACTTCC14.3478260869565215No Hit
GAGGCGCGCGAGGGCGAGCGGCCCGGCCGCTCGCTCAGCACCGGCCTGCTGGGCTGGCTGGAGACGCTGCG14.3478260869565215No Hit
CACAAAGACGCCAAATATTTCAGTGTAGATAAAATCGGCACTGATCAATTGGAAGATATGGCAAAACGCAG14.3478260869565215No Hit
GCGTATGGCACACGAACTTTAGCGGCAGATTCTCGAGCGGAACGATCTCGTCGCGCACGATGTTGGTGACC14.3478260869565215No Hit
GAGCTGAACCCGTGCCAGCCGGGCGGGCGCCGGCTCTACTTCAAGGGTTCGAAGTCGAGCGCGTCCAGTTC14.3478260869565215No Hit
GATATTCCCCTGCCTCTTTGTACAGACGGCGACCGCGAATTTTGCCCCCGCCCGTTTGATGCTTGATGCGA14.3478260869565215No Hit
AATCCTAACCGTAATCATAATAAGTGGGTTTAGGAGATGCGACTATTCTGTCTCTTATACACATCTGACGC14.3478260869565215No Hit
CCCTATTGGTCGGGCTGCTCTTCGCTGGCCCCATCGAGTGGATCGTCACCGCGATGATGAAACGGCACCTC14.3478260869565215No Hit
GCCAGGCGGTGCGCCTTCGGATCTATGAGAACGCCACCCCGCGCCCGCCGCCGCCTGCCGCCCAGGAGCCG14.3478260869565215No Hit
GACCAAGGTCGGCCCCCCCCCCGAACGCGAAAGGTTGAACCCCCCCCCGCCCCCCGGGGGGCGGGCGGGGG14.3478260869565215No Hit
GATATTTCCTTTTCTACCATTGACCTCAAAGCGACTGAAATCTCCACTTGCAAATTCCACAAAAAGAGTGT14.3478260869565215No Hit
GTTCTGTGCAGCGACGCGAGGGCAGGGATCGAAGTCATCGGCGCAGGCTAAACATCGTTTGGAGCCCATGG14.3478260869565215No Hit
AGAATGCCGCGTGCGCGCGCGGCTTTCAGCGCAATGTGGTTCACGCCGGCGCCGAAATTGGCGATCAGCTT14.3478260869565215No Hit
AACACATTGAGGTCACCCAGGGACATGAAAGTCTGAGTACAAGGACACCGAATGATAAAGGGTATACCTGT14.3478260869565215No Hit
CCTGGGCCTGGGCGGCGAGCACTACGACCTGGGCACGGATGGCGAAATCGCCTTCCAGCCACTGGCACGCA14.3478260869565215No Hit
ATCTTCTTGATTTTTCGTGATGCGTTGCATGCTGCTGTCGGTGGACTGAAACGCGACAGCCATGAATCTAG14.3478260869565215No Hit
GTGGATGCCTGTAATTTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCTGTCTCTTATACACATCTGACGC14.3478260869565215No Hit
GTCGTCCGCGATACCGAGGCCGAGGCACGCGCTGCCGCCGACAGGCTGTTGTCGAAACTCGACGCCGCGCA14.3478260869565215No Hit
CTACTGGACCAGCTGCAGGATCTCGATCTGGTCGGGCACCGTCAGGAAGGTGCCGGCCCCCGAGGGCATCT14.3478260869565215No Hit
GCTCAGGATCGCGTTGCCGACGGGATCAACGATCTCGCTGTCCGCGCTCAACATCTTCGATCGTGCCCCGC14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)