FastQCFastQC Report
Thu 12 May 2022
EGAF00003619238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155888822
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACA6555270.42050930373955864No Hit
CTCACACACACACACACACACACACA2923200.187518255798995No Hit
ACACACACACACACACACACACACAC2190280.14050269749296074No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)