FastQCFastQC Report
Tue 28 Jun 2022
EGAF00003619277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96961505
Sequences flagged as poor quality0
Sequence length90
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7734210.7976577921310112No Hit
GCCGTGAGCACCCTGTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGC989950.10209721889114655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)