FastQCFastQC Report
Wed 11 May 2022
EGAF00003619298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151758239
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTCGC5341351535.19645150863934No Hit
AGCTGGAT3472091422.87909653458749No Hit
GTGACTTG3205318521.121215698872202No Hit
CATGAACA3025385419.93555947891567No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)