FastQCFastQC Report
Wed 11 May 2022
EGAF00003619317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163459519
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACGT4244935225.969336175521228No Hit
CCTGTGCG4196841525.67511225822217No Hit
TACTCTTC4089528425.018600476855678No Hit
ATGAGAAA3107539719.0110659753012No Hit
AGGAGAAA53517333.2740418133739886No Hit
TCCTCTTC2516030.1539237369222896No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)