FastQCFastQC Report
Wed 11 May 2022
EGAF00003619319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151100007
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAGACC4163017627.551405738849503No Hit
ATCTCTGT3899272325.80590416517982No Hit
TAGCTCTA3832473025.363817488109053No Hit
GGAGAGAG2718297317.990054097085515No Hit
GGAGCGAG34458032.280478385417944No Hit
CCTAGACA1666770.11030906173286942No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)