FastQCFastQC Report
Wed 11 May 2022
EGAF00003619324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135032689
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCATGTG5294677939.21034187506997No Hit
TTTCATGA3511818926.0071759364875No Hit
GAAGGAAC3313951424.541845567483293No Hit
ACGTCCCT124990059.256280899508711No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)