FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003619442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAACCTCCCAAAGT45.063291139240507No Hit
GTGCTGATCGACCACGCGACGAAGCTGGCCGAGAAAATCCGCATCTCCGG33.79746835443038No Hit
CCGCTAACGCTTCATCAAGAGCGGCATCGGGGCGGGTCATCGCGGCCGGA22.5316455696202533No Hit
CCCATCCCCTGTGGCCAGCTTAGCCAAGGTAATAGTAGCAGAAGAACCTA22.5316455696202533No Hit
GCCCAGCACCAGACGACCTGAAAGGTTGGCGATGGAAATAACAGTGACTG22.5316455696202533No Hit
CTGGCGGTGTGATGAAACGCCTTGACCTTGCCATTAACGATAAGACAGGG22.5316455696202533No Hit
CGCTGGCGTTGGCACCCTGCAGCTGGCCTTGTTCGGATTCGGACACGCGG22.5316455696202533No Hit
CGCCTGGTGCGCTCGCTCCTCCTCGGGTTTTTTCCCTTTTTTTTTCCGCT22.5316455696202533No Hit
GTCCTTGGTGCCCAGTCACGCAGGTTCTCAGCAAGTGGTGGCAGGACATG22.5316455696202533No Hit
GTTCTGGCTGTTTTGTTTTGTTTTGTTTTTTCTTTTTCCCTACTCATGGC22.5316455696202533No Hit
GTGCCCGGCCTGCGGGTTCGTCGCCGACATCACGGACGGGGCCGCGCCGT22.5316455696202533No Hit
ACAAGCACCTGCTGGCCTTGCTGATCTGAAGCTACATCTAAATCATTTTT22.5316455696202533No Hit
GCTCAGCAATGAGTAACGGTCAGTATTTTGAGTGAGCGACTCCTGAGAAA22.5316455696202533No Hit
GGTGGCTGGCGCTGGCTGCGGCGCTGCCGCCCAGGCCGCCGCGCAGATCG11.2658227848101267No Hit
GTGCTGGTCGAGTCACCAAGATCATCAAGTGATGTGATCTGAGCTTTTCA11.2658227848101267No Hit
GTATTAAAAATGTGTGCAATACTGGCAGAAGCAGGCTTTCTAATTATTGT11.2658227848101267No Hit
GAATAGAGGTCGGTGGGTATTTTTTTCCCCTACTTCCAAGATGATATGTT11.2658227848101267No Hit
ACCCAATGGCTAGGCCTGACAAGGTCGCTGCGGTCGCCGAGCTGAAGGAG11.2658227848101267No Hit
CCCTTGTCGGGTGCGCGCATGATCGCATTGATGCCCGCGCCGACAGATTT11.2658227848101267No Hit
ATGGAATGGAATGGAATGGAATGGAATCAAACCGAGTGGAATGCAATGGA11.2658227848101267No Hit
CCTGGGCTCAAGCAATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTA11.2658227848101267No Hit
ATCTTCCCCCTCTATCTCTTCCTGATGGGGCTCTTCATCTGGCCGCTGGC11.2658227848101267No Hit
GGAGATCAGCGCGCCGGTCTTGAGCTGCTGCAATCGCGTGACGCCGTTCA11.2658227848101267No Hit
ATTTAGGTATGAGGGGAAAAGTTTTCAGCCCTTTTCCTGGCATAGACCTT11.2658227848101267No Hit
GCCTATGACGCTACCGTCTCCCCGTCTGATCCGAGCCTGTGGCAGGTCAC11.2658227848101267No Hit
GTATAAGAGACAGGATTCAGTCTATATCGATAGACGTCACCTCGAAATAG11.2658227848101267No Hit
CAGTGAAGCATATCAGAAAAAAAAAAAAAATCAGCGGTCCAACGACGAAA11.2658227848101267No Hit
GTTGTTATCGCCGTGCTTATGATCGCGTTCTCCGGGTGGTTAGATGCTCT11.2658227848101267No Hit
TCCCACTACACCTGCACCTGTGCTCCAGCCCAGGCAGGGTCTAAGCTCCC11.2658227848101267No Hit
GGGACAAAAAAACCTCCACCTAACATGTTCCTGGGCTTTTGCTTTCCATT11.2658227848101267No Hit
GGTCACGCTCTTCCACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCA11.2658227848101267No Hit
GATATATTCATGATTTATAATAATTGCAACTCTCAGAAACTAATAGCCAG11.2658227848101267No Hit
ATTCATCAACACCTTTTTACTGTTTTGTAGCTAAATGAAAAATTATTGTT11.2658227848101267No Hit
ACTATCCACTTGTTGTACTGTAGAGGAAAAACAAAGAATTCTAGATACTG11.2658227848101267No Hit
TCTCCATGTTGCCCAAGTTGGTCTCAAACTCCTGACCTCAAGTGATCCAC11.2658227848101267No Hit
GTTTTATTGTTTTCAGTCATCAAGTTTGTGGTAATTTGTTATAGTGGCAA11.2658227848101267No Hit
CTCTGAGACGTTCCATTTTGGATGGATTATGAAACAGCCCCAGAAACAAT11.2658227848101267No Hit
GTGCCGCTCGCGGCCTCGCGCACCTCGAAGCCCAGCGGAGCGAGCATGCC11.2658227848101267No Hit
ATGCTGCTCGGCACGGCCGGGCAAAATGCCTGGTTGTAGCGGTTCGAGCG11.2658227848101267No Hit
CCTTCTCCTCTCATTGCACTAATCTCACTTTATTGTTGTGGCTTAAGAGT11.2658227848101267No Hit
GTGCTGTATGAAGCCTGTTTTTGGCATACTTTTTGGTCGGCATAATCGGC11.2658227848101267No Hit
CGGACGCATTGCCAGCCTGACGTTTGTCCACAAGGATGGCACCTCGCAGG11.2658227848101267No Hit
GGCGAAAGAGTGAGACTCTGCCTCAAAAAAACAAAAAACAAAACAAAACA11.2658227848101267No Hit
TAAATTACCTGACCTCCATAAGCCCCTACTGTAACTGGAGAACCACAATG11.2658227848101267No Hit
GGTAATGCACGCTGAATTCGCCGCGTGACAAGGCCAGGCGCAAGTCAGTC11.2658227848101267No Hit
GGAAGGCCGGGATCTCCTTGAGCAGGTCGTTGTCGACCACCTGCTCCTCG11.2658227848101267No Hit
GCTCTGTGGTGCTGTGTGTTGTTCAGCCATTGCATGTGATTTACAGCCCA11.2658227848101267No Hit
ATTATTATCCTTGCTTTGCAGTTGAGGAAACTGAGGCACCATGAGGTTAA11.2658227848101267No Hit
CGGCTAAGTCATCTGGGGCCAAAACCACGACGAAGCCCACCAGCACTAAG11.2658227848101267No Hit
GTGCTCCCACCAAACAGTAGTTTCCACTCATCTTGCTCAACACTACCCTG11.2658227848101267No Hit
GTTCAAAGATGAGCAAGTCAAAGAGCATTGCCATGGAATGTGGGAGCAAA11.2658227848101267No Hit
ATGTAATGTGCTTGAATCATCCTGAAACCATCCCTGCCCAGTCTGTGGAA11.2658227848101267No Hit
CAGGTCAACTCCGTCAAGGGCGCTGATGAGGTCATCCTCGTCAAGGGCCT11.2658227848101267No Hit
GAGACTCCGCCCAGCATCTCGCCATAAGCAGGCACCATGTTGCCGATGTT11.2658227848101267No Hit
TCATCGGCCTCGCTGCACCACGTCTCCACGTCGGCCCCGTCGGCGGCGAA11.2658227848101267No Hit
TGCCCAAGCTGGTCTTGAACTCCTGGCCTCAAGCGATCCTCCTGCCTCAG11.2658227848101267No Hit
CTGTTATCTGTGCTGGTACTGGTTGGAGCCGGGGTGTTCTTCTACGTCAA11.2658227848101267No Hit
TAGAATATTTTTGCTAGAACTAAGATTATCAAGAGTTTCAAGATAACTGA11.2658227848101267No Hit
CCGCCGCCGGCGGCCAACACGATGACGGCAGCCACTCCGTCGATCTCGGC11.2658227848101267No Hit
GGCTTTCTGTGCCTGGTCTGTTTTGGCGTCTCCATTTTCTGCAGGGTTAT11.2658227848101267No Hit
TGCCTGGCCTATGTATTTAATTTTACCAGTAGGCTTTGTACCTTCAGGTG11.2658227848101267No Hit
ACATGGTGAAACCATGTCTCTACTAAAAATACAAAAAAAATTAGCTGGGC11.2658227848101267No Hit
GCAGTGGATTGATCTTGGCTTACTGCAACCTCTGCCTCCTAGGCTCAACC11.2658227848101267No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)