FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003619443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCCGCTCGCATTCTGTTTCGAGCATGCGGATGATGTCTTCCGCACTGT33.79746835443038No Hit
ATCAGATATCGGCCGCTCCACAAGCATGAGGCCCGAAGGTCCCCCACTTT22.5316455696202533No Hit
GCCCCTTATTTCCCTATGGGAATATAGGCACAGTGATGCCAGCTTTTTCA22.5316455696202533No Hit
GGAGGTCGGCGCGCTGCTCGCGCTGACGGGCGTCCTCGACATGATCATGC11.2658227848101267No Hit
GGCTTGAGGGACCGGCCCTCGTGAAAAGCTCAGATCACATCACTTGATGA11.2658227848101267No Hit
GCCTTTGTGTGCTTATCGTCTAAATAGACATCCAGAGTCTGAAAAACAAC11.2658227848101267No Hit
GGGGGGGGTGGATATCGTGCTCGGTGGCGTTGCGCTGCACCTCGTAGCCC11.2658227848101267No Hit
GCCTGGGTTTCCAATTTATCGACACGCAGCTGCTGGAAACGGTCGGTCTG11.2658227848101267No Hit
GGTGGTCGGCGCGCTGCTCGCGCTGACGGGCGTCCTCGACATGATCATGC11.2658227848101267No Hit
GTAGGCGGTGGCGGGCGCCAGGATGTGGCTGTAGTTGCCGGCAATGGCCA11.2658227848101267No Hit
GGGAGCTCGACACCGGCTGGCGCGGCGCGCACCTTCAGCGTGCGCGTGTA11.2658227848101267No Hit
GTCTGAGCTCCATAAGAGAGGCTGCCCCTCCGGCCACCACTCATTTGATG11.2658227848101267No Hit
GTCCCAACCCCTCCATCACTCTCCACAGGGCTCCCTTGCCATTTTACCTT11.2658227848101267No Hit
TGCCCCCTCCATAAACTGGCGGTTATGAAGGCGCTGCTACTCGAAAACAT11.2658227848101267No Hit
CACTATGGCTGGGCACGGTGGTGGCTCATGCCTGTATTCCCAGCACTTTG11.2658227848101267No Hit
GGCTGGCTCCAACATGAGAAGTCCGGAGTCTCGGCAGAAATCCTTCATTG11.2658227848101267No Hit
CCCACACGATATGGAATGGCCTGGGTTGGGTGGCTACTCCATCTGCATGT11.2658227848101267No Hit
GGCATAAATTCTCTGATCTCTAATGTGGGTCCTGCATTCTTCAAAACAGG11.2658227848101267No Hit
ACACTACCCTGGAAAAAAAAAACCAAAAAAAAAGAAAAAATAGGCTCTGA11.2658227848101267No Hit
ATGTTCAGACAAGCATGAACAAATCATATGGCTTGCATCTGCCTAGTCTG11.2658227848101267No Hit
ACTCAGGTTGATTCCATTCCATTCCGTTCCATTCCATTGCATTCATTTCC11.2658227848101267No Hit
AGTTTATGCATATTAGAGTAAACAGTGAAATCACAATAGAAAAAAATGGA11.2658227848101267No Hit
ACCCTTCCAAGTAACCTAAAGTGGTAAGAAATATAGGCTTAATTATCTTC11.2658227848101267No Hit
GGGCGACGCGCTGCTCCCGGGTCCCGACGACGGACGCCGCCGCCTGTACG11.2658227848101267No Hit
GACAACGAAAGCTACTTATTATGGTTATGATTCTATCTACAGGAAGAACA11.2658227848101267No Hit
GGCCTGTAGCTGTCAGGCACAATATCCAGGGTTGCCTCTGGGAGATTTCT11.2658227848101267No Hit
GCGTTGGGGCTGATGAGCTGAAAGATTTTCCGGGCTACGGTAAAGGCCTT11.2658227848101267No Hit
GGCCCTGTCGTCTCGGGAATGGGACGGTCAAGGCTTGGCATCACACCGCC11.2658227848101267No Hit
CTGCGCGTATTGCTCTCGGAGCCGATGTTTCTCGACGGACATCGGCTGCA11.2658227848101267No Hit
GGGAGAAGGTACTCAGAGGCAAAACTTAGCAAATCAAACATCCAACTTCT11.2658227848101267No Hit
GCCCCTTATTTCCCTTTGGGAATATAGGCACAGTGATGCCAGCTTTTTCA11.2658227848101267No Hit
GGGGGGGGGGGGGGGGTTCGGCTCGCCGGTGCGGTGCGTGGGGTTAGTGC11.2658227848101267No Hit
CTGCATGACTGGGCACCATGGAAACGGCACACCCACGCACCCACCCCACA11.2658227848101267No Hit
GGGGGGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGCGGTGGGGGCGGG11.2658227848101267No Hit
CTGGTGGAACCGCTCCATAGACAGCCTGCGCGTGCCGGTCAACGTTGCGT11.2658227848101267No Hit
ACGCAATGCGATGATGGAACAGGCACTGGAAACCGTAAAGCAGCAAGATG11.2658227848101267No Hit
ATCGTTATCAGACAAGGAGAACGCCTCGGTCTCCTTGTTGATCTGCTGCT11.2658227848101267No Hit
ACTCTGGAGGCTGAGGCACGAGAATCGCTTGAACCTGGGAGGCCGAGGTT11.2658227848101267No Hit
GTAATGAACTGTAGCGTTTCTTCTTTTGTAAAGTTGTGTTTCAGGAAAGA11.2658227848101267No Hit
GTCCCTGTCTTATCGTTAATGGCAAGGACAAGGCGTTTCATCACACCGCC11.2658227848101267No Hit
GGCTGCTGTTTTATTATTTTCTTTTGTATGTTGTTCCTCTTATCCTTTGG11.2658227848101267No Hit
GGCTTTAATCAATTGTGAGTTGATTTTTGTATATGGTGAGAGTTATGAGT11.2658227848101267No Hit
GAAATAGGGAAAAGCTGATGCTGGCAAGGAGGGGAATAACCCTGCAGAAA11.2658227848101267No Hit
GGGTTAATAATTAGTGAATAATTCACAATGTTGTGCCTCATTATAATCCA11.2658227848101267No Hit
GCCCCTTATTTCCCTATGGGACTATAGGCACAGTGATGCCAGCTTTTTCA11.2658227848101267No Hit
CTATAAGGGCGAGCCTTTGGCCAATGTTCCGGTTACCGCGACATTCGAAG11.2658227848101267No Hit
CTCGCGCCCCACGCCCGGGCTCCGCTCCGCTCGTCGTGGGGAACCCGGGC11.2658227848101267No Hit
GGGGGGGGTGGGTCTGATTTTTTGGGGTGTGGTGGACAGTGGCTCTGTGG11.2658227848101267No Hit
GGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGAGGGGGGGGGGTCGGGG11.2658227848101267No Hit
GTGGTGGAACCGCTCCAGTGACAGCCTGCGCGTGCCGGTCAACGTTGCGA11.2658227848101267No Hit
GGGTCGACTCCTGCCCGGGGAGCTCGTTGATCCCGCTCCCGCAGTGCGGT11.2658227848101267No Hit
TCCTAAAAGCAGCCAAAGAAAAGAAGCACATAACATCTAAAGGAGCTCCA11.2658227848101267No Hit
GCATCGACCTATGACTGGCTCCCACGAGCAATCGAGCCATGTGGGGGATG11.2658227848101267No Hit
CTGCATGACTGGGCACCAAGGATACGGCACACACACGCACCCACCCCACA11.2658227848101267No Hit
ACGGTGGCCACGTCACCATGAATAAAGGCGAGGGCGGTGGGGCCGACGAG11.2658227848101267No Hit
TCACCATGCCGGTGGCCGCCGAGGTACCGCCGAGAAATGCCAGCATCGCC11.2658227848101267No Hit
GGCCTACCTCCAGTTCCTGCGCGAGAGCTTGAATGCCCAGCGGCGTTCGC11.2658227848101267No Hit
GGTGGTGCGAGGATTTGCGATCCAGGCCCCTTGTCCACACTCCACCGCCC11.2658227848101267No Hit
GTGTAAATAAGAATAGCTAGTATATATTGAACTTTTTTTTTTTTTTTTTG11.2658227848101267No Hit
GACCGGGGCTTACCAGGCCAGTCCGCTCACGGTATGGCCGCCCATGGTGA11.2658227848101267No Hit
CTCGCGCCCCACGCCCGGGCTCCGCTCCGCACGTCTTGGGGAACCCGGGC11.2658227848101267No Hit
GGGTTGCCGGCGGGGTCGACGTCGGCGAGGACGACCTGGTCGAAGCGCTC11.2658227848101267No Hit
CTCCCTACCCCTCCATCACTCTCCACAGGGCTCCCTTGCCATTTTACCTT11.2658227848101267No Hit
GCCTTTGTGTGCGTATCGTCTAAATAGACATCCAGAGTCTGAAAAACAAC11.2658227848101267No Hit
CGCTGTACACGACCACCGACAACCGGCCGCGCATGCTCGAGGAGCTGGGC11.2658227848101267No Hit
GGGATGCCGGCGGGGTCGACGTCGGCGAGGACGACCTGGTCGAAGCGCTC11.2658227848101267No Hit
GAAGGGGCCACGGGTAGAAATGCTCCTCCCACCCCACCCCTGCAAGTGCC11.2658227848101267No Hit
GCCTGGGTTTCAAATTTCTCGACACGCAGCTGCTGGAAACGGTCGGTCTG11.2658227848101267No Hit
GGGTCGAGCTGCAATCCCCAACCTTGTTGGCCCCAGGGACTGGGTTTGTG11.2658227848101267No Hit
GGCTCACACATGTAATCTCAGCACTTCGGGAGGCTGAGGCAGGAGGATCG11.2658227848101267No Hit
AAGCTATTCAGGCTGTTTTATCGCAGGATCCCAAAAGGTTATCATTTAAT11.2658227848101267No Hit
GGGTTAATAATAAGTGAATAATACACAATGTTGTGCCACATTATAATCCA11.2658227848101267No Hit
GTGCTCACCATGCTTTATGAGTCGGTCCAGATCAGTGAAATATTTACAGA11.2658227848101267No Hit
GCCGCTCCCTTGGTAAGTGATTGCACTACAGTTTTTGCTGGGGAGATCCC11.2658227848101267No Hit
GTGTTTGGCTCGTCAGGTGCAAATCGCTCGCACCGCAGCGCGCGGCGGCA11.2658227848101267No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)