FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003619736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTCGACCATCCGATGACCGACCCCGAGGGCCGCACCTTCTGCTATGC312.0No Hit
GTTACGCTGGGGCTAAAAAGCAAAGCCTTGATGAAAGTAGTTTGGAGTAT312.0No Hit
CTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGGATGGGGGGGACC28.0No Hit
GACCTCCACCAAGGACCTGCTCGCGCACCTGCTCGGCGAGGGCACCCTCG28.0No Hit
ATCTCGTATATATTTATGAGGCGGAAAAGAAAATAAATGCAGTCGTAGCC14.0No Hit
CAGAAAGGCTCAGGCCGATAAGAATGGGGAGCAATTTCTTCATTTGCATT14.0No Hit
CCCCGATAACGTGGTGTTGTGCCTGCTGGCGGCGGACGAGGACGACGACA14.0No Hit
GGGGACAGCAACGCCCGCCTCGGTGGAGGATGTATTTTTGCAGCAAGCCT14.0No Hit
CCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAATCCATTT14.0No Hit
CTTATACACATCTCCGAGCCCACGAGACATCAGCCTATCAATCGCGTATG14.0No Hit
AATCGAAGAAGCGCTGAAACTGCTGCCGGGAGAAACAGAAAAGAAAGAAA14.0No Hit
AGCGAAGGCTTCTCAAATCATGAAAATTATTAATATTACTGCTGTTAGAG14.0No Hit
GACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAG14.0No Hit
GTCCTAAATGGTACGCCACAAGAGATAAGAAATACCTTCCCAAGGGAGAG14.0No Hit
TCCCGCAGCGCAACGCAAGATGAACGGGCGATGGCGTTGTGCGCACGGGG14.0No Hit
AAGGCAATCCTAAATGCAGCTGAAGAAAAGAAAACTGCAGTTATAATTGC14.0No Hit
AGGTAGAGAATACCAAGACGCGCGGAAGAACCTTTGTTAAGGAACTCGGC14.0No Hit
GTTCTACCAAAAACATTACCAACCAAACCTCCCCTGTTCTATTTTCAGAC14.0No Hit
GTACATGGGGTGTGTGACGTGTGGCCTTTGAGATCAACTCTCCTGTACCA14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)