FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003619737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCTGCCGGCCGACACGCGTTCGGCGATGCGCGTGAGCACCTCGTAGG312.0No Hit
CACTCATATCATAACTAAAATCATCATGGCTGACATTTGGCAGCTTCCCA312.0No Hit
GGCTTGGGCAAACCCTCATGCTGCACATGGCAGGTGTATCTCTGCTCCTG28.0No Hit
CCGTACGGCTGCACCGCCTCGACGAGCTCGCCCTTGGCCCGGGCGATCGC28.0No Hit
GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCTAGCCTTCGCGT14.0No Hit
GCTGAGACTACTCGAAAAACTGTAAAACATGGGCATTATTTTAATTCGTG14.0No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC14.0No Hit
ACATTACTGATGTAAATCCTGCTTCAATTGCTTTCTTAGCGCCTTCATAT14.0No Hit
GAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGAT14.0No Hit
AGACGTGTCACTGCCTGCCGGAGCTCTTCTTCTCCCTTAATATGACTGTC14.0No Hit
ATCCGGATCCTCTATATCGGCTGCAATAGTCGGAATATCTGAGACCTCTG14.0No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.0No Hit
GGCTAAAGTTTGCAACCTGATACGACGGCTTGCGGGCGAGAAGGTCGGTG14.0No Hit
GATCTCGGCCGTGACGAGAGTGAGCCGTTGCCGGCCGCGGGGTGGAAAAG14.0No Hit
GACTTCAGGTGATTTTTTAGGGTTTCTTGCATTACAATTTTTACTCTATT14.0No Hit
GGGTTTTAATCATCATCAGCACCTCACTGTCATCCTCGATCTTCCCTTTC14.0No Hit
TCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTAGGACTT14.0No Hit
GTGTAGGGAGTAACTGCTTGAGTAACTACAAAGGTATTTCAAAAACTTCA14.0No Hit
GAGCTATGATATCAATTGGCTTCCTAGGGTTTATCGTGTGAGCACACCAT14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)