FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003619818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3292
Sequences flagged as poor quality0
Sequence length140
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGTAATACTTCAG210.637910085054678No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT200.6075334143377886No Hit
CTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGA180.5467800729040098No Hit
GTTAAGAGCCTCCGCCCGTCTCTGGGACTATGGACGGGCACGCTCATATC180.5467800729040098No Hit
ATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGTAATACTTCAGATCA180.5467800729040098No Hit
CTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAA160.48602673147023084No Hit
CACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCT150.4556500607533414No Hit
CTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAAT140.425273390036452No Hit
GGTTATTATCGTCGCGGTTACCGTAATACTTCAGATCAGTTAAGTAGGGC140.425273390036452No Hit
CGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCG130.39489671931956255No Hit
GGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGG130.39489671931956255No Hit
GTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAACAGTCGCA130.39489671931956255No Hit
GATTTACTGGACTCGCAACGTGGGTCCATCAGTTGTCCGTATACCAAGAC130.39489671931956255No Hit
GCAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGT120.3645200486026731No Hit
GTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGAT110.33414337788578374No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG100.3037667071688943No Hit
GTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGT100.3037667071688943No Hit
TAATACTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGA100.3037667071688943No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT100.3037667071688943No Hit
CCTTAATATATTCGCTGGTTTAACTGACGAAGCTCAACATGCTGAAATCA100.3037667071688943No Hit
ATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATG100.3037667071688943No Hit
TACTTTAGGTGGGCCTTGGCTTCCTTCCGCAGTCAAAACCGCGCAATTAT90.2733900364520049No Hit
GGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCCCTAAT90.2733900364520049No Hit
ATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGT90.2733900364520049No Hit
TTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGTACT90.2733900364520049No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT90.2733900364520049No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA90.2733900364520049No Hit
CCGTAATACTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGC80.24301336573511542No Hit
CCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGAT80.24301336573511542No Hit
TCTTTGATTAGCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTGGG80.24301336573511542No Hit
GGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTT80.24301336573511542No Hit
CTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTC80.24301336573511542No Hit
CTCTGGGACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGG80.24301336573511542No Hit
CGCAAGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGG80.24301336573511542No Hit
TCCGACGACATTGATTGCTGCATTCCGCTCAACGCTTGAGGAAGTAAAAG70.212636695018226No Hit
GTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTC70.212636695018226No Hit
GGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCCCTAATC70.212636695018226No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA70.212636695018226No Hit
GTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACT70.212636695018226No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA70.212636695018226No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAA70.212636695018226No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAA70.212636695018226No Hit
AAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCC70.212636695018226No Hit
ACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGATTTGAG70.212636695018226No Hit
GCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTTCTTTGATTAGC70.212636695018226No Hit
ACCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGG70.212636695018226No Hit
TTCTTTGGTCGCAATCCTGCAATCAACGCCGCAACTTTACGTCGGATTAG70.212636695018226No Hit
TCTCTGGGACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGG70.212636695018226No Hit
AGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGGGTCT70.212636695018226No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.212636695018226No Hit
GGATTAGCTCTTCTTTGATTAGCATGAAACTCCAAGGTCCGGGGGGGTCA70.212636695018226No Hit
CCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGGA60.18226002430133656No Hit
TTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGT60.18226002430133656No Hit
GTGACAAGGTTTCCCCCTAATCGAGACGCTGCAATAACACAGGGGCATAC60.18226002430133656No Hit
GAGTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTCC60.18226002430133656No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA60.18226002430133656No Hit
ATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGT60.18226002430133656No Hit
GTACATGGGTAAGCTCGGCAATCGCTCTTGCCGTGCGAGATGCTAGCAAA60.18226002430133656No Hit
GTCTCGTACGGTTAAGAGCCTCCGCCCGTCTCTGGGACTATGGACGGGCA60.18226002430133656No Hit
CCGCCCGTCTCTGGGACTATGGACGGGCACGCTCATATCAGGCTATATTT60.18226002430133656No Hit
GTCCTTACAAGTCCGCTCCTCGGGGAGCTTGATTGATAATTCTGTATAAG60.18226002430133656No Hit
GAGTTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGT60.18226002430133656No Hit
GTATCAACGCAGAGTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGT60.18226002430133656No Hit
TCTGTGAATGGCGACTATGCGCCTAGTCAACCAGATGTGTGCTAGCCCGT60.18226002430133656No Hit
GTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAG60.18226002430133656No Hit
GCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAA60.18226002430133656No Hit
CATTCAAATTGACCTCCCTCAGGAAGCTAAGAAATACTATCTCGGCAATA60.18226002430133656No Hit
CAATTATCCCCGTCCTGATTTACTGGACTCGCAACGTGGGTCCATCAGTT60.18226002430133656No Hit
CAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTT60.18226002430133656No Hit
GCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGCTTCCTTCCGCAGTC60.18226002430133656No Hit
ATCAAGCTCCCCGAGGAGCGGACTTGTAAGGACCGCCGCTTTCGCTCGGG60.18226002430133656No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG60.18226002430133656No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.18226002430133656No Hit
GGAATAAGCTGACGGTGACAAGGTTTCCCCCTAATCGAGACGCTGCAATA50.15188335358444716No Hit
ATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTTCTTTGA50.15188335358444716No Hit
GGTATCAACGCAGAGTACATGGACCCCAGCAGAAGCCGGTGATGCCGGCC50.15188335358444716No Hit
CCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCCCTAATCGA50.15188335358444716No Hit
TGTTAATACCCGCACGCTTTAAGCAGTTGTAAGAACGAACAGAAAGATCC50.15188335358444716No Hit
GCACGGATGTTTGGTTAAAGAACAGTCGCAGTTTTCCTCAAATCCCGCCA50.15188335358444716No Hit
GTATCAACGCAGAGTACATGGGAAGCGGCTACAGTGTTCTTCTTTCAGAT50.15188335358444716No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC50.15188335358444716No Hit
GGGTTATTATCGTCGCGGTTACCGTAATACTTCAGATCAGTTAAGTAGGG50.15188335358444716No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCT50.15188335358444716No Hit
TGATAATTCTGTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAG50.15188335358444716No Hit
GGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAAC50.15188335358444716No Hit
GACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTA50.15188335358444716No Hit
GGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAG50.15188335358444716No Hit
GAGCAATGATTGCACAACCTGCGATCACCTTATACAGAATTATCAATCAA50.15188335358444716No Hit
GTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTCCGC50.15188335358444716No Hit
GATGTGTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAG50.15188335358444716No Hit
GAGTACATGGGACTCTGTCTCAGGGGATCTGCATATGTTTGCAGCATACT50.15188335358444716No Hit
ATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTT50.15188335358444716No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA50.15188335358444716No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC50.15188335358444716No Hit
ATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTCAAGCA50.15188335358444716No Hit
CATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGAT50.15188335358444716No Hit
ACCTGCGATCACCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGG50.15188335358444716No Hit
GGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGAT50.15188335358444716No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA50.15188335358444716No Hit
ACCGAGATCTACACTTTTTTTTTCGTCGGCAGCGTCAGATGTGTAAAAAA50.15188335358444716No Hit
GCCTAGTACGCGCGGGGCTCGAAAGGTACTAGGCCCTTATAGGGGACGAA50.15188335358444716No Hit
GGATATCATCTGCTTCAAGCTCCTCAAGCAGCCGAAGCACTGTTTTTTTC50.15188335358444716No Hit
GTACATGGGAAGCGGCTACAGTGTTCTTCTTTCAGATACAGTAGGATTTA50.15188335358444716No Hit
GATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCCAG50.15188335358444716No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA50.15188335358444716No Hit
ATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTT50.15188335358444716No Hit
CTTGTAAGGACCGCCGCTTTCGCTCGGGTCTGCGGGTTATAGCTTTTCAG50.15188335358444716No Hit
CTTCTTTGATTAGCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTG50.15188335358444716No Hit
GGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTA40.12150668286755771No Hit
TTCCGACTTCGATTCGCTTCGCCCCGGCGACTGCACCGAGCAGGGTGCCA40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA40.12150668286755771No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC40.12150668286755771No Hit
CTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGCTTCCTTCCGCAG40.12150668286755771No Hit
CGCTCTTGCCGTGCGAGATGCTAGCAAAGGTGTACTTCTCAGCGGAGCAG40.12150668286755771No Hit
GTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACA40.12150668286755771No Hit
GGTCGCAATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCT40.12150668286755771No Hit
GAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAA40.12150668286755771No Hit
ATTCAAGACGTTAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTT40.12150668286755771No Hit
CTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTG40.12150668286755771No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit
CAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GTCAAAACCGCGCAATTATCCCCGTCCTGATTTACTGGACTCGCAACGTG40.12150668286755771No Hit
GGGATATCATCTGCTTCAAGCTCCTCAAGCAGCCGAAGCACTGTTTTTTC40.12150668286755771No Hit
GTTTTTGATCACGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCT40.12150668286755771No Hit
GAATTCAAGACGTTAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCT40.12150668286755771No Hit
GGTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAA40.12150668286755771No Hit
GTCGCAATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTT40.12150668286755771No Hit
GTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGG40.12150668286755771No Hit
CCCCTGTGTTATTGCAGCGTCTCGATTAGGGGGAAACCTTGTCACCGTCA40.12150668286755771No Hit
GTGTTATTGCAGCGTCTCGATTAGGGGGAAACCTTGTCACCGTCAGCTTA40.12150668286755771No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACACAAAAAAAAAAA40.12150668286755771No Hit
GTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTAC40.12150668286755771No Hit
GTTACCGTAATACTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAAT40.12150668286755771No Hit
GTTTCGTGGCGGGATTTGAGGAAAACTGCGACTGTTCTTTAACCAAACAT40.12150668286755771No Hit
GTCCATCAGTTGTCCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTT40.12150668286755771No Hit
CCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTC40.12150668286755771No Hit
CCCTCAAGGCCGCCATCGGCGTGGGCTATGCCGCAGCCGTGATGCCGGTG40.12150668286755771No Hit
GGCCTTGGCTTCCTTCCGCAGTCAAAACCGCGCAATTATCCCCGTCCTGA40.12150668286755771No Hit
GTGCATATTGCAGCTGAGCCAGCTCAATTTGAAGTTTGCCTTCTCTCGTT40.12150668286755771No Hit
TATCAACGCAGAGTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGTT40.12150668286755771No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC40.12150668286755771No Hit
CGCTTACACACCGGACGCTTGGATCAGTGGGAAGTGCTCACGCGCGGAGC40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG40.12150668286755771No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GTTCAAAGATTTTAACTGAACACCTTAATATATTCGCTGGTTTAACTGAC40.12150668286755771No Hit
GGCCATAAGCAGTCCTCTCCTTGAAGGCAACAGCATACAAGGTGGAAGGA40.12150668286755771No Hit
GTACATGGATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATG40.12150668286755771No Hit
CTCTTGAACCGTGTTAATACCCGCACGCTTTAAGCAGTTGTAAGAACGAA40.12150668286755771No Hit
CTTTCATCATATCTTCTTCCGTCTTGTTCGCAAGCTCTTGAACCGTGTTA40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT40.12150668286755771No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit
CTTATCTGCCTAGTACGCGCGGGGCTCGAAAGGTACTAGGCCCTTATAGG40.12150668286755771No Hit
CATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit
TTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCG40.12150668286755771No Hit
CGGCTACAGTGTTCTTCTTTCAGATACAGTAGGATTTATTCAGGATCTTC40.12150668286755771No Hit
ACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTG40.12150668286755771No Hit
ACTCCAAGGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGG40.12150668286755771No Hit
TGTATCTTATCAGGTAGAGAACACTCGTGTAGGCCAAGTTGCAAACTATG40.12150668286755771No Hit
CCCCAATTCCTCCGCCTTGCCGGGAAAGGTTGATCCCTTGTCCCGTCAGA40.12150668286755771No Hit
ATTTAGGACGCACGCAGCCCTATTACGAGGGTTGTAGTCGTGTGGCACCA40.12150668286755771No Hit
AACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGATTTGAGGAAAA40.12150668286755771No Hit
GTTTTCCTCAAATCCCGCCACGAAACTAAGCGATTGAACTCTTGCCTGGT40.12150668286755771No Hit
AACAAGAGAGGCGATCAGCCAATCGGCGTGATTCCGATCGATTCTATCTA40.12150668286755771No Hit
GTGTACTTCTCAGCGGAGCAGAAAGATCATGTTTATTGGAAGCATCAACC40.12150668286755771No Hit
ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAA40.12150668286755771No Hit

[WARN]Adapter Content

Adapter graph