FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003619819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3292
Sequences flagged as poor quality0
Sequence length140
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT250.7594167679222357No Hit
CTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGA240.7290400972053462No Hit
GTTAAGAGCCTCCGCCCGTCTCTGGGACTATGGACGGGCACGCTCATATC220.6682867557715675No Hit
ATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATG190.5771567436208992No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG170.5164034021871203No Hit
CACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCT170.5164034021871203No Hit
ATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGTAATACTTCAGATCA170.5164034021871203No Hit
GGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGAT160.48602673147023084No Hit
GGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGTAATACTTCAG160.48602673147023084No Hit
CCGTAATACTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGC150.4556500607533414No Hit
TCTTTGATTAGCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTGGG150.4556500607533414No Hit
GTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTCCGC150.4556500607533414No Hit
CTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAAT150.4556500607533414No Hit
CTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGCTTCCTTCCGCAG140.425273390036452No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA140.425273390036452No Hit
CTCTGGGACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGG140.425273390036452No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT140.425273390036452No Hit
GTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGT130.39489671931956255No Hit
GTACATGGGTAAGCTCGGCAATCGCTCTTGCCGTGCGAGATGCTAGCAAA130.39489671931956255No Hit
GTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTC120.3645200486026731No Hit
GTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACA120.3645200486026731No Hit
TCTCTGGGACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGG120.3645200486026731No Hit
TCTTTAAAGGCTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTG110.33414337788578374No Hit
ACCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGG110.33414337788578374No Hit
GTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAGAACAGTCGCA110.33414337788578374No Hit
GGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCCGTCTA100.3037667071688943No Hit
ATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGT100.3037667071688943No Hit
GGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGG100.3037667071688943No Hit
GTCTCAGGGGATCTGCATATGTTTGCAGCATACTTTAGGTGGGCCTTGGC100.3037667071688943No Hit
CAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTT100.3037667071688943No Hit
AGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGGGTCT100.3037667071688943No Hit
GGAATAAGCTGACGGTGACAAGGTTTCCCCCTAATCGAGACGCTGCAATA90.2733900364520049No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT90.2733900364520049No Hit
CCTGGAGATTGTCTCGTACGGTTAAGAGCCTCCGCCCGTCTCTGGGACTA90.2733900364520049No Hit
GCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAA90.2733900364520049No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.2733900364520049No Hit
CGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCG80.24301336573511542No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.24301336573511542No Hit
ATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA80.24301336573511542No Hit
TTGTACGGCCGTTCAGCCACGAGTCACGGGGTCTAACGCCTACCAGTACT80.24301336573511542No Hit
ACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTG80.24301336573511542No Hit
CAGTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTT70.212636695018226No Hit
CCCTAATCGAGACGCTGCAATAACACAGGGGCATACAGTAACCAGGCAAG70.212636695018226No Hit
CTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTG70.212636695018226No Hit
TATCAACGCAGAGTACATGGGAAGCGGCTACAGTGTTCTTCTTTCAGATA70.212636695018226No Hit
GCTACAGTGTTCTTCTTTCAGATACAGTAGGATTTATTCAGGATCTTCCG70.212636695018226No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC70.212636695018226No Hit
TCGCAATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTTC70.212636695018226No Hit
GTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGGTTAAAG70.212636695018226No Hit
CATTCAAATTGACCTCCCTCAGGAAGCTAAGAAATACTATCTCGGCAATA70.212636695018226No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA70.212636695018226No Hit
TCCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGC60.18226002430133656No Hit
ACGCAGAGTACATGGGCAAACAAGAGAGGCGATCAGCCAATCGGCGTGAT60.18226002430133656No Hit
GCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGT60.18226002430133656No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC60.18226002430133656No Hit
TTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTCCGCCCGTCTCTGGGAC60.18226002430133656No Hit
CTTTAAGCAGTTGTAAGAACGAACAGAAAGATCCAATTCTTCAATTGTCA60.18226002430133656No Hit
TAATACTTCAGATCAGTTAAGTAGGGCCATATGCCTCGGGAATAAGCTGA60.18226002430133656No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTT60.18226002430133656No Hit
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG60.18226002430133656No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT60.18226002430133656No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG60.18226002430133656No Hit
GTATCAACGCAGAGTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGT60.18226002430133656No Hit
CTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACTCTTTAATAGCCTTC60.18226002430133656No Hit
ACCTGCGATCACCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGG60.18226002430133656No Hit
GATTTACTGGACTCGCAACGTGGGTCCATCAGTTGTCCGTATACCAAGAC60.18226002430133656No Hit
TCCCTACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCAC60.18226002430133656No Hit
CTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCTTTGCCCG60.18226002430133656No Hit
AGTCAAAACCGCGCAATTATCCCCGTCCTGATTTACTGGACTCGCAACGT60.18226002430133656No Hit
ACGCAGAGTACATGGGTAAGCTCGGCAATCGCTCTTGCCGTGCGAGATGC60.18226002430133656No Hit
TCGCACGGATGTTTGGTTAAAGAACAGTCGCAGTTTTCCTCAAATCCCGC50.15188335358444716No Hit
CCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGAT50.15188335358444716No Hit
ATCCTGCGTAATCAACGCCGCAACTTTACGTCGGATTAGCTCTTCTTTGA50.15188335358444716No Hit
CCTTATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGGA50.15188335358444716No Hit
GTGACAAGGTTTCCCCCTAATCGAGACGCTGCAATAACACAGGGGCATAC50.15188335358444716No Hit
GAGTACATGGGGGAATTCCTGGAGATTGTCTCGTACGGTTAAGAGCCTCC50.15188335358444716No Hit
ACATATATAGGAAAAGGGAAGGTAGAAGAGCTGAAGGCACTCGTGGAAGA50.15188335358444716No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA50.15188335358444716No Hit
TACTTTAGGTGGGCCTTGGCTTCCTTCCGCAGTCAAAACCGCGCAATTAT50.15188335358444716No Hit
TCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGATC50.15188335358444716No Hit
GGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCCCTAAT50.15188335358444716No Hit
GTTAAAGAACAGTCGCAGTTTTCCTCAAATCCCGCCACGAAACTAAGCGA50.15188335358444716No Hit
GTACATGGGACTCTGTCTCAGGGGATCTGCATATGTTTGCAGCATACTTT50.15188335358444716No Hit
GTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGGATGTTTGG50.15188335358444716No Hit
TACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGCACA50.15188335358444716No Hit
CTTCAATTGTCATTTCAAGAACTTTCTCTTTTTGATCTTCTTCTTCTTCT50.15188335358444716No Hit
GTACATGGGTAGCCACCTATATAGTATAGCTTCCCATCTTCTTTGAGAGT50.15188335358444716No Hit
AAGTAGGGCCATATGCCTCGGGAATAAGCTGACGGTGACAAGGTTTCCCC50.15188335358444716No Hit
CCGCAGACCCGAGCGAAAGCGGCGGTCCTTACAAGTCCGCTCCTCGGGGA50.15188335358444716No Hit
GACTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTA50.15188335358444716No Hit
CCAAGGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGC50.15188335358444716No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.15188335358444716No Hit
CTGCAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTA50.15188335358444716No Hit
TATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAA50.15188335358444716No Hit
CTATGGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTATC50.15188335358444716No Hit
ATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTA50.15188335358444716No Hit
AATCTGTGAATGGCGACTATGCGCCTAGTCAACCAGATGTGTGCTAGCCC50.15188335358444716No Hit
CCTTAATATATTCGCTGGTTTAACTGACGAAGCTCAACATGCTGAAATCA50.15188335358444716No Hit
CTTCTTTGATTAGCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTG50.15188335358444716No Hit
GTTCACAAGGGAAACTAGTCAATCGTCTTTGCGAAGTCCGAGTCCAAGTT40.12150668286755771No Hit
GTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATTGCACAACCTGCGAT40.12150668286755771No Hit
GTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAAC40.12150668286755771No Hit
GTATGCCCCTGTGTTATTGCAGCGTCTCGATTAGGGGGAAACCTTGTCAC40.12150668286755771No Hit
ACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GTATCAACGCAGAGTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAA40.12150668286755771No Hit
GATGGAAGCACTGGACCGAAAGAAGCAATTGCGCTTGGTTCAAAGATTTT40.12150668286755771No Hit
GTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAACT40.12150668286755771No Hit
CTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTGATCCCTTCCG40.12150668286755771No Hit
ATATATTAAGGTGTTCAGTTAAAATCTTTGAACCAAGCGCAATTGCTTCT40.12150668286755771No Hit
AGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCGCACGG40.12150668286755771No Hit
GCAATAACACAGGGGCATACAGTAACCAGGCAAGAGTTCAATCGCTTAGT40.12150668286755771No Hit
TATACAGAATTATCAATCAAGCTCCCCGAGGAGCGGACTTGTAAGGACCG40.12150668286755771No Hit
CTGCCTGATTTTATACCGACCGCCGGAAGGGATCACATTATGGTCAGTGC40.12150668286755771No Hit
ATATATAGGAAAAGGGAAGGTAGAAGAGCTGAAGGCACTCGTGGAAGAGC40.12150668286755771No Hit
GTCTCGTACGGTTAAGAGCCTCCGCCCGTCTCTGGGACTATGGACGGGCA40.12150668286755771No Hit
GCCCAGGATGAGTCCCTCAGCGTGACGCAGTAAACTAGTAGCATCCCGAT40.12150668286755771No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GTCCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAGCAATGA40.12150668286755771No Hit
CGTTAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTTAAAGGCTG40.12150668286755771No Hit
TAGTAGCCTAGAGCGCCAGGGGCGGAAATTCGCCTGAAAAGTTTTGCCGG40.12150668286755771No Hit
GTACATGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACTTCCCA40.12150668286755771No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC40.12150668286755771No Hit
GGATTGTAGCCCAGGATGAGTCCCTCAGCGTGACGCAGTAAACTAGTAGC40.12150668286755771No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAA40.12150668286755771No Hit
ACAGTAACCAGGCAAGAGTTCAATCGCTTAGTTTCGTGGCGGGATTTGAG40.12150668286755771No Hit
CCGTATACCAAGACGTCTAAGGGCGGTGTACACCCTTTTGAGCAATGATT40.12150668286755771No Hit
GGTCCGGGGGGGTCACTTATCCTGGGCTTCATCCAATGGTGGGTGCTAAC40.12150668286755771No Hit
TTCGTGCACGCCGAAGATCTCCTGGATCACCAGGATCACCGGCAGGCCGG40.12150668286755771No Hit
GTGTAGGCCAAGTTGCAAACTATGATAAACTTACACTTGTTTGGACTGAT40.12150668286755771No Hit
GGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATCGGGATATCATC40.12150668286755771No Hit
CTGTATGCCCCTGTGTTATTGCAGCGTCTCGATTAGGGGGAAACCTTGTC40.12150668286755771No Hit
CTTTTGAGCAATGATTGCACAACCTGCGATCACCTTATACAGAATTATCA40.12150668286755771No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGGATGAGTCCCT40.12150668286755771No Hit
TCCTAGTTCACAAGGGAAACTAGTCAATCGTCTTTGCGAAGTCCGAGTCC40.12150668286755771No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT40.12150668286755771No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit
GGTGAGGGAGGACGTGCCTTTCAGAGAAGTGGAAGAGTCCATAGGAAGGA40.12150668286755771No Hit
GATTAGCATGAAACTCCAAGGTCCGGGGGGGTCACTTATCCTGGGCTTCA40.12150668286755771No Hit
GCCTCCGCCCGTCTCTGGGACTATGGACGGGCACGCTCATATCAGGCTAT40.12150668286755771No Hit
GAAGCGGCCATAGCCCAGATGCGAGGTGGAAAAGTCACACTAGAGCGACA40.12150668286755771No Hit
TCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGC40.12150668286755771No Hit
TTAATAGCCTTCAGTGACTGTGAGATGCCGTCTACGAGTGGCACGAATCG40.12150668286755771No Hit
TAACAGTTCTTGGCGCAAATAGCGCTGAATCGCTTCTTTAAAGGCTGCAG40.12150668286755771No Hit
ATTATCCCCGTCCTGATTTACTGGACTCGCAACGTGGGTCCATCAGTTGT40.12150668286755771No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA40.12150668286755771No Hit
CAATTATCCCCGTCCTGATTTACTGGACTCGCAACGTGGGTCCATCAGTT40.12150668286755771No Hit
TCTCAACAGCGAGTGTATTTAGGACGCACGCAGCCCTATTACGAGGGTTG40.12150668286755771No Hit
GGACGGGCACGCTCATATCAGGCTATATTTGGTCCGGGTTATTATCGTCG40.12150668286755771No Hit
CCAATGGTGGGTGCTAACTCTTTAATAGCCTTCAGTGACTGTGAGATGCC40.12150668286755771No Hit
TGTTTGGACTGATGGAAGCACTGGACCGAAAGAAGCAATTGCGCTTGGTT40.12150668286755771No Hit
CATATCAGGCTATATTTGGTCCGGGTTATTATCGTCGCGGTTACCGTAAT40.12150668286755771No Hit
CCTAGTCAACCAGATGTGTGCTAGCCCGTCGAGACTGAAAAGCTATAACC40.12150668286755771No Hit
GCCCCTATGTCCCCCAAACTTCAATGGGGTTGGCGCGCCCCGTAGGCCCG40.12150668286755771No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG40.12150668286755771No Hit
CATGGGAAGCGGCTACAGTGTTCTTCTTTCAGATACAGTAGGATTTATTC40.12150668286755771No Hit
GGTTATTATCGTCGCGGTTACCGTAATACTTCAGATCAGTTAAGTAGGGC40.12150668286755771No Hit
CTTGTAAGGACCGCCGCTTTCGCTCGGGTCTGCGGGTTATAGCTTTTCAG40.12150668286755771No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA40.12150668286755771No Hit
CGCAAGCACCGGCTGTCGAGTTGTACGGCCGTTCAGCCACGAGTCACGGG40.12150668286755771No Hit
ACGCAGAGTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA40.12150668286755771No Hit

[WARN]Adapter Content

Adapter graph