FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003619896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAA211.76470588235294No Hit
GTTTTGTATGTTTGTTTGTTAGAGATTGGGGTCTCACTCTGTTGCCCTGA211.76470588235294No Hit
ATGCGCGACTGCACCTCGGCGTCGCCGGCGATGGACTGCAGCGCAGTCGC211.76470588235294No Hit
CCATGAAGCTGGGACGCAAAGGCGCCCGATCAGTTCCCCAGCCCTCCCAC15.88235294117647No Hit
ATGGAATGGAATGGAACGGAACGGAACGGAACGGAACGGAACGGAACGGA15.88235294117647No Hit
GTTGAGGGCATTCAATTCATTCGATGACGATTCCATTCAATTCTGTTCAA15.88235294117647No Hit
GTGAAATACCACTACTCTGATCGTTTTTTCACTGACCAGGTGAGGCGGGG15.88235294117647No Hit
GTCCACCTTACAGAAAGACAAAAAGAAACCCCTTTTTATATCTTAACAAA15.88235294117647No Hit
ACCCAGAGCCATGTGGCTGTGCCCTCTGGCCCTCACCCTCATCTTGATGG15.88235294117647No Hit
CATATGCGCGGGAAATCAAGAACTATGATATTTTTCTGTTTAAACAGCTT15.88235294117647No Hit
AGCCGAATGCCTCTATCACCGTGCAGTACAAAGCACTGATGGCGACTGAA15.88235294117647No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG15.88235294117647No Hit
GAATCATCTAATGGAGTGGAATGGAATAATCCATGGACTCGAATGCAATC15.88235294117647No Hit
GGTTGTTACCCTTCCCAACTTCATCTGGCAAGAGAAAGGCAGGCCAGCCA15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)