FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003619897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGCGACCCGCTCCGGGGACAGTGCCAGGTGGGGAGTTTGACTGGGGCG211.76470588235294No Hit
GTTCCTCACGGTCGCTGCCGTGGAGGCCATGGTGACGGCCGGTTCGGTGC211.76470588235294No Hit
AGCAGCCTACATAGCAGGATCAACCCAATGGCCAAGGATGTCCACTCAGT211.76470588235294No Hit
ATCAAACAATGATGAAAATGATTGAACGCGATTATAGGATAAAACGGCTC15.88235294117647No Hit
AGGGACACCAGGGGCTCCAGGCAGCCCATTATTCCCAGGAGGACATGGTG15.88235294117647No Hit
GTATTGAATGGAGTTGTCATCAAATGGAATTCAAAGGAATCATCATCAAA15.88235294117647No Hit
GAATGGCTGGTCGATGCGATCGGACCTGCCGCCGTGCACATCCCCGACCG15.88235294117647No Hit
GTCTGTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGC15.88235294117647No Hit
GTTATAAACACCATAGCAAATTAAAAAAAGCTGTTTAAACAGAAAAATAT15.88235294117647No Hit
GGCGTGAACTTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTG15.88235294117647No Hit
CTCTCCATTCCATTGCACTCGGGTTGATTTCATTCCGTTGCATTCCATTC15.88235294117647No Hit
GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA15.88235294117647No Hit
GGACTCATCATCGAATGGATTCGAATGGAATCATCGTATAAAATTGATTG15.88235294117647No Hit
TCAGAAATTGTTAAGTTAAGCTTTTTCAAAAAATCAGCAATTCCCCAGCG15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)