FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003619969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACATGGGGAGCGGCCCGGGGCGACTGAGCGGACAAA212.5No Hit
TTCCAGAGGACCGGAACACTTGCCTTTGAGCGGGTCTACACTGCCAACCA212.5No Hit
CTCCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA212.5No Hit
GGTATCAACGCAGAGTACATGGGTGGGGGAAGGAGCAGCACCAAATCCAA212.5No Hit
GATAATTCCACAGCACATCTCTAGCAAATTTAGCCTATTCCTATTCTCTA16.25No Hit
CATGAGACATGAACACCAGGAACGTGCTGTCAGAGGTCTTGTGCTCTGGG16.25No Hit
GCTCCGGGATGCTGTCCTCCTGGTGTTCGCCAACAAGCAGGACCTCCCCA16.25No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAA16.25No Hit
GCTGAGGACCACCTGAAACGGGCATCGTCGCTCTTCGTTGTTCGTCGACT16.25No Hit
CTGATATATTCTGCAAATACCAGTCTTTATTATGGGAGCTTTATAGTAGG16.25No Hit
GATCACCGATTGGAGAGCCCAACCACTCCTCTGCTAGATGACATGGATGG16.25No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)