FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003619996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003619996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAAGGGCGGGACATGAAAGAGGGGAGAAGGGATGGCCTGACGGGGAGA24.3478260869565215No Hit
ACGTGGTGCGCCGTCATCCCGACAAATACAGCGTTTTTGCGCTGACCGCC24.3478260869565215No Hit
CGTCTGGATTGCCGCCCTGTCCGTGATCGTCTTCGTGGAGAAGATACTGC24.3478260869565215No Hit
GACGTGACCCGGATGGCCGGAAGACTTATGCCTTCAGTGTCGGGTATCCC24.3478260869565215No Hit
ACCATCGCCAGCACGCATCTGGCGCGCATGCTGCGCGAGGCGTCGTACCC24.3478260869565215No Hit
ATACATCTCCGACCTGATCGCCTGGGGCGCCATCGGCGCGCGCACCACCG12.1739130434782608No Hit
ATACGAACCCGGCCTCTATGACAGCCGAGATGTCGGCAACTTGCACGCTC12.1739130434782608No Hit
AAAGAGGCAGGAGCCAGGTTTCCTGAGCTCTGATTCTTAGAAGCCTTGCT12.1739130434782608No Hit
CCGTTCGTGTGGACGTATGGCTACCTGACGGCGCTGTGCTTTTTCGTACC12.1739130434782608No Hit
TTACTGATGCTGGCCGGGTGTGCGCCTATGCATGAAACCCGCCAGGCGTT12.1739130434782608No Hit
CAGCTTGGCAGGCGTGTTGGCCACCGGAAACAGCTTGCGCGTCGCCTTGT12.1739130434782608No Hit
GCCCCAGGATAGAAGCGTTGAGATAAATGTTTTCCATACCGGTCAGGTCG12.1739130434782608No Hit
CGCCGACGGTGATATCGAAGGCGCCGCGGCTTTGCTCCGAGACCTGTCGG12.1739130434782608No Hit
CCTGACCATTGCGGACCGCGTGACCGTTTCGGTCGGCACATCCATTACCA12.1739130434782608No Hit
GGTTTGTGTACCATACGCGCGCCAACGGCCGGAGCCGCACGTGAAACCGC12.1739130434782608No Hit
GTGCTGGTAATCGACGATTCCAGCACCATTCGCCGTACCGCGCAGATTTT12.1739130434782608No Hit
GCGGATCGGGTTCCGGTATGTCGTCGGCCGTTGCGAGCGCGCGAGCGCGG12.1739130434782608No Hit
CCCCATCACCGGCGAACGCACGGGCTGGGATGCCTGGAGCCAGCAACAGG12.1739130434782608No Hit
AGTGAAGACACCTCGTCTTCACGCTTGCCGCCATGACAACGTCTGCCTCG12.1739130434782608No Hit
GGGCGACGAAGCGGCCGTCAATTTCGTGAACAGCCGGCCACGCCTGCGGC12.1739130434782608No Hit
GATCACAGGTCTGCGCCAGGCGTACAAGCTGCTCTACAAGAGCGATCAGA12.1739130434782608No Hit
CCGCGCAGAACGACGACGAGCGCTTCGACTCCGATGTCGCGCTGATGACC12.1739130434782608No Hit
TCATTCTATCGGGCGGCATCGATCTATCGGTGGGGGCGGTGGTGGCGCTC12.1739130434782608No Hit
ATGCGGGGCGGCGCTCCAAAACGGCCAAGACACAGGCAGACCCCATGTCC12.1739130434782608No Hit
GGGACTCAGGGTTGTGCTGGCTGAGATCATTGAGGGCCCACAGCGCGGCC12.1739130434782608No Hit
GACGTGGATCAGCAGCACCAGCAGGTAGGCGATTAGGCCGAGGGTTTTGA12.1739130434782608No Hit
ATTCCCCTAACCGTAAACATCTAGAGGCTAGAAATACCTCAGTTTCTGAG12.1739130434782608No Hit
AGATTGCATGACGCGGCTCCTCCATTCTTTTTAGACAATCAGGGGGACCA12.1739130434782608No Hit
GATCACAGGTCTGCGCCAGGCGTACAAGCTGCTCTACAAGAGCGATCTGA12.1739130434782608No Hit
GTCATCGACGACCACATCGCCGGGCGCGCGGCCGCGGCCAGCGCCGTGGC12.1739130434782608No Hit
GAACTGGCAGGCGATGTGTCGATGGCCCTGCTGTGGGTGCTCGAGCGCCT12.1739130434782608No Hit
GTGCACGCGTCGTACAAGGATGGGAATTACGACGGCCGCTATGCGTGGAT12.1739130434782608No Hit
GATCAGCAGCGCGCCGGCAGCCTGGTGCAGATACTGGCCGGCTAGGCGCA12.1739130434782608No Hit
ACCATCGAGTGGGAGTAAGCGCCGGCGCCTCCATCGCGGAGGCCGCCGGG12.1739130434782608No Hit
GCTCTCGGGCGTCTCGGGGGGCTGGGGTTGCGTGGGGTCGGACGACATGG12.1739130434782608No Hit
GCGATGTACTGCCACACGTCGAGTTCCGTCCAGTTGGAGATCGGGAACAC12.1739130434782608No Hit
CGTGGAAGGATCGAACAAGCTGCTGCAGCTGACGCTGGATGTGGGCGAAG12.1739130434782608No Hit
GAAGTTGTGCTTGACGATCGGGCGGGTGATGCCCACGGTGTCGCATTCCT12.1739130434782608No Hit
TGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCACTGC12.1739130434782608No Hit
CCTGTAGCTCCGCCAACTCCGCCGCAGGCGCCTCCGGCGCGCCCAAAACC12.1739130434782608No Hit
GAAACAGCCTCCATCCCTCCCCTCGGGCTGGCCTATGCCTCTTGGGAGGG12.1739130434782608No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)