FastQCFastQC Report
Tue 10 May 2022
EGAF00003620008

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620008
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86501
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAATACAGCACATAAAAGAGATTACATTAAGAGAAGAGACAGGAACT1380.15953572791066No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC1220.14103883192101827No Hit
TGCATGCACTGCCTTGGTGACCAGGGAAGTCACCCCACGGCTATGGGGAA920.10635715194044No Hit
CATATAAATAGCTTGGGTCAAATCTGTGCTTTCTGGCAGCTGGGCACCAA910.10520109594108738No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)