FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003620179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCAACAGCGCTCGCACCGCGTCGATCGGGAAGCCCAGTTCGCGCGCAC33.488372093023256No Hit
TGGCTGCGCACCGCGTCGTGAATCGGACGGCTGATGACGATGCGCGCATG33.488372093023256No Hit
CTCGAAGAAGGCGCCGAGAAGCTCGAAGACGCGATCATCAAGGCGACCAA33.488372093023256No Hit
CTCTTATACTGGCCTTTTCCAAATCTTTTACCGCTCAGTAGGCTTGCACG33.488372093023256No Hit
CTTCTCATACAGGTTGGTGAGTTCGGCCTCATCGAGCTTCGCGCCTGGCA22.3255813953488373No Hit
CTCCGGCCATGATCCCAGGCCCCCATAGGTTGCCAGCTCCGGAATCGTCA22.3255813953488373No Hit
CTCAAGCACTGGGCCGCGCGTCCCGAGATCCAGGCCGTGGCCGTGCTCGG22.3255813953488373No Hit
CCGCCCTGGCGACCGTTTCTCCTTTGCGCTCGACGGCGCCGCGCCCAAGC22.3255813953488373No Hit
GTATTGATCCAGCCAGAGAGCGATCTCGGCGTCGGAGACCGGGGTGAAAA22.3255813953488373No Hit
GCTCTGGCCCTGATCGGCCGCCCCGAGGTGGTGATCCTCGATGAGCTGAC22.3255813953488373No Hit
GATCCAACGCGACGCTGCGCCAGCGGGATGCTGCGCTCGCCTTCAACCGG22.3255813953488373No Hit
GTCGAGGCCACGCAGGCGCCCGAGCTGGCGCGGCGCGCTGTTCGCGAGTC22.3255813953488373No Hit
TCCTCATCCTGACTGCACTAGCTTTAGCTATCGTTCGATATAACATTTCC22.3255813953488373No Hit
GCATCACCTGGTCAGTGATCACAAGGTGGTGGCTGCCCTGCGCACTCGTG22.3255813953488373No Hit
GCACAAACTCGTCGAGCTCCATGCGCATCTCTTCGGCCGCAGTGGACTTG22.3255813953488373No Hit
GGACATTCTCGGGCCCGAAGCCGGCCTGCCGGAACTGCCGATGTTTGCGA22.3255813953488373No Hit
GTCTTTCGCCATCTCGGGCACGCTTTTTTTGCTCAGTTTCTTTGGCAAGA22.3255813953488373No Hit
CCGTAGACGACGCAGCTCTCGCGGCTCTGCCCGAACGTTCGGGCGCCGGC22.3255813953488373No Hit
GCGCGTCGTGCAACGCACGTCCGGCCATGATCTGGTCCACATGCGGCGTG22.3255813953488373No Hit
CGTGTTTACTGCTCAGTGAGGGCGCGATCGGCGCGCCTCTCCATCCAAGG22.3255813953488373No Hit
GGAATGGCTGCCAATCGTGGTGGCGACCGTCGTATCGACGTGGCTGTCGA22.3255813953488373No Hit
TAGTAGACGTCGGCCATGTTGGACGTGTCGATTTTCAAGGCTCTAAACCC22.3255813953488373No Hit
GGTCGCAGGTGCGCGCGATCGGGTTGGGGCGGTGATCGTCGCCGGCGCCG11.1627906976744187No Hit
ACCCAGGAACGCATCATGGGCATGCTGCAGACCGGCAAGCCGGTGCGTAA11.1627906976744187No Hit
CGGCCAGCTGGCGCGGGGCGTTCAGCACGTACGACAGAAACAGCGGATCC11.1627906976744187No Hit
CGGCTACTTCAATTCGCAGATGCGCTTTGTGCCGCCGCTGCGTTCCGGGC11.1627906976744187No Hit
GTACTCGGCTTTATCGGTGCCGACGTAGTGCCCGAGTTCGCAGGAATCTT11.1627906976744187No Hit
GTACCGGCCTGCCGGGCTGCTCGACGGGGCTTCGACCACGAACTACTCGT11.1627906976744187No Hit
GTGCTGAGCGTCAGGAAATCGCGCCGGCTCATGCCGTGCGCAGGGGGGTG11.1627906976744187No Hit
CGACACGAAGAAAGACGCCGTGTCCGCCACCCTGCCCGAGCAAACCGTCA11.1627906976744187No Hit
GGCCTTCAGAACAGCGTGTCGAATATGGGAGGCGTGGTCGGCCCGATCGT11.1627906976744187No Hit
TATAGAGCCAGATGAACAGCGCCAGCGCGCGGTAGGTGTAGAGGCGGTAG11.1627906976744187No Hit
AACTGTGGCCACTGGTCGGGTGCGCCGATCATGGGCTGCATCGCCGCAAG11.1627906976744187No Hit
GGCTGGAGCCGATTCAACGCACTATCGCAGCGCGAGACCGACCCAATACA11.1627906976744187No Hit
TTGGTGCAGTAAGGAATGGACATCAAGGTAGATAGCTTTCTTAGGAGGAG11.1627906976744187No Hit
GGATTTGATCGTGGTCATCACACCAGTTATCGACGGTACGGGAATCAATG11.1627906976744187No Hit
TGCGTGCGCTGGCGGATGGCACGATCGACGCGATCTGTTCCGACCACACG11.1627906976744187No Hit
GTCGCGCTCTGGGACGGCTGGCTGGCCGCCGGCCTGGCCCAGCTGCGCCA11.1627906976744187No Hit
GAAAAACTATCGATGCTGCACTATCTGTCCCTGATCAACTCGGCGGATTG11.1627906976744187No Hit
TGCCAACAGCGCTCGCACCGCGTCGATCGGGAAGCCCAGTTCGCGCTCAC11.1627906976744187No Hit
GATGGAGACATCGTGCTCGCCAGCGTCTCGGTCGCGCCGGAGGCGGGATC11.1627906976744187No Hit
CATCGCGAGATCCTTGCCCCGAAGTTCGCTGTCGTTAATGAGGTCCTCAC11.1627906976744187No Hit
GGCCGAGTCGGCCAGCGCCTCGGCCTGCCTGAGGCGGGCGGCCGCGGCGC11.1627906976744187No Hit
GGCTATAGGTAGATTGATGTCGACCTGACGGTCAGCTCGTAGTCAAGAAC11.1627906976744187No Hit
NGCAGGTGGATCACCGTACATCAGGAGTTCGAGACCATCTGGCCAATATG11.1627906976744187No Hit
GTTCTCGGATGCGGGCTTCGCCGTCATCTCCGGTGGGGGCCCCGGCATCA11.1627906976744187No Hit
GGACTGGCTGCCAATCGTGGTGGCGACCGTCGTATCGACGTGGCTGTCGA11.1627906976744187No Hit
GCGCAGGTCGGCAAAGGACATTGCGCCCGGCTGCAACGTGATGATGGGGG11.1627906976744187No Hit
GAGCGTGGAAGGCGCCGACAACCTGCGCTACGCGGGTTGGTACCTCGTCA11.1627906976744187No Hit
GACGCACACATCCGCGACCCCGCCCTCGACCAGGCGGCCCGCGCTGGCCG11.1627906976744187No Hit
ATTCATTCCTTTTGCAAGCGCGCTGATGAGGCGCGGCGTCAGAGCAGCGC11.1627906976744187No Hit
GGCCTGCGCGTCGATGGCCGGTTGGTCGAACACCGGATGCTCGTATTCGA11.1627906976744187No Hit
CAAGTTGCTTCTGGCGGTGCCGCACAACCAGTTTCCGTTGTGCCGCGGCG11.1627906976744187No Hit
GAAGGGCACGATGTAAGAGCCGTCCTTCGACGGGCCGACCTCCGCGTCAT11.1627906976744187No Hit
GTCATGTGCGTCCTCGTTCGGTTGGCGTTTTGGCTGGTGCTTCGATTTGA11.1627906976744187No Hit
GTCCAGCGCGAGCCCGAGCCCGGGCGAGACGATCCAGGCCAGCCCGTCGG11.1627906976744187No Hit
GCCCAAGCCAGCCGTGTCGGCAGTCCAATCGCCCAGGGCTGTGCCCAGGG11.1627906976744187No Hit
ACATCAGCCGAGACAGGCTGCAGGGTACCTATGCACTTGATGCCAATTGC11.1627906976744187No Hit
ACGCTGGTTCGAGCACGCGGGGCAGGGCATCGAATTGCGTGGGCCAAGCG11.1627906976744187No Hit
GGCCAGCATGCGGTCGACCAGCTCGATCCAGTGTTCGACCGGCGTATCCG11.1627906976744187No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)