FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003620408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCATCATGATGCTGCTGTCGGCTTCGGGGGGCAGCACGTCCACCAGTG313.636363636363635No Hit
ACGCAGAGTACATGGGAATGCAGCTCAAAACGCTTAGCCTAGCCACACCC14.545454545454546No Hit
GGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTG14.545454545454546No Hit
ACATTGAAGTTGACTTACTGAAGAATGGAGAGAGAATTGAAAAAGTGGAG14.545454545454546No Hit
TCCCTCAGCTGTCCTGTGCCCCGCCCTCTCCCGCACACTCAGTCCCCCTG14.545454545454546No Hit
GTTTCTTGCTTGGAAGCCAGGTACAGGAGAGGCAGCATGCTTGGGCTGAC14.545454545454546No Hit
CCTGGGAATTATACATTCACATGGACGGCCCGGCTTGCCTTCTCCTATAC14.545454545454546No Hit
GCTCCCTCCTTTTCCACCTGAGCTCTTCCTCCTACACATCACAGCAGCGA14.545454545454546No Hit
TTCTCTCTCCACCTATCCATTAGCCTTCCTAACGTCCTACTCCTCACACT14.545454545454546No Hit
CTTCTAAAAATATCTCCAACTTCAACAATGCCCTGGAGTCAAAGACTGCT14.545454545454546No Hit
ATTGACCACTACGTGACACCTGTGAAGGCTGGCCGCCTTGTTGTAGAGAT14.545454545454546No Hit
TTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC14.545454545454546No Hit
TAACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACC14.545454545454546No Hit
ACCTGGCAGCGGGATGGGGAGGACCAGACCCAGGACACGGAGCTTGTGGA14.545454545454546No Hit
GCTGTCAAGAGTCCCTGAAGATGTCCCATCAATGGAACGCATACAGCAGC14.545454545454546No Hit
GTCTGTACCACTCCAACCATATCCAATCCACTTAGAGCAACTGGCCATCC14.545454545454546No Hit
GATCAAGACCATCCTGGCTAACACAGTGAAACTCCATCTCTACTAAAAAT14.545454545454546No Hit
GAGCCCACTGGGCGAACAGCAACGTTATAACGGCCACTCAGTGGTTCGTC14.545454545454546No Hit
CTCCTTCTTCCCCATTACCCGGAGGCCGAAGCCCCCAGCCAGGGCGGGGC14.545454545454546No Hit
TGTACCAGCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAAC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)