FastQCFastQC Report
Fri 1 Jul 2022
EGAF00003620910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77112457
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTT8000401.0374977417721238No Hit
ATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTT7801391.0116899789615057No Hit
TTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTT2239050.29036164675702136No Hit
TTATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTT1423820.1846420222351364No Hit
TTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTT1395040.18090981071968698No Hit
ATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTTTTTT1092540.14168138878002554No Hit
TTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTTT798770.10358507964543263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)