FastQCFastQC Report
Wed 11 May 2022
EGAF00003620918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65787924
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTT2466300.37488643052484827No Hit
ATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTT2249730.3419670151014341No Hit
TTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTT700790.1065225891608922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)