FastQCFastQC Report
Wed 11 May 2022
EGAF00003620920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50452807
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTT6117201.2124597943579234No Hit
TTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTT5891341.1676932068417918No Hit
TTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTT1586060.31436506595163277No Hit
TTATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTT1296980.25706795659555676No Hit
TTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTT1121330.2222532435113075No Hit
ATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTTTTTT700040.13875144746654036No Hit
TTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTTT563450.11167862275730268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)