FastQCFastQC Report
Thu 12 May 2022
EGAF00003620922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003620922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118111831
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTT12025931.0181816587027595No Hit
TTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTT11794650.9986002164338642No Hit
TTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTT3241140.274412814750116No Hit
TTATTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTT2379640.20147346627790402No Hit
TTTTTTATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTT2257240.19111040620477723No Hit
ATTTATTTTTATTTTATTTTATTTTTTATTTTTTTTTTTTTTTTTTTTTT1519600.1286577294699631No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)