FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003621134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length146
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCCTGGTGCGCAGGGGCGGGACGGCGAAGGTCGACGGTTACGGTGGC545.45454545454545No Hit
GGCCACCCGGGGCGACGCGCGCGTGACCCGCATCGGCGCCTTCCTGCGGC19.090909090909092No Hit
GTATCCTGGTGCGCAGGGGCGGGACGGCGAAGGTCGACGGTTACGGTGGC19.090909090909092No Hit
GTATCGACGAGATTGCCACCGGCGTCAACGAAGCGACGAACCAACGAGCG19.090909090909092No Hit
CATAGCGGAGTTGCCGTCAACGTTGGCGTTCTCCCGCTTGGCATCAGCTT19.090909090909092No Hit
GGTAGCAGTTGCCCGGCTACGTGCGCCCTGATTTTGCCGGCGTCTTCCTC19.090909090909092No Hit
GCGAAGGGGGTGTTACGCCCCATCCCGGCTCCGTCCCCGGGAATAATCAT19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)