FastQCFastQC Report
Tue 10 May 2022
EGAF00003621226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19280
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT720.37344398340248963No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA590.30601659751037347No Hit
GTACATGGGACACCCCGCGCAGGATTCGGACGGAGAGCGCGAGGACTCGG410.21265560165975103No Hit
TGCCTGGACAGTGGCCCTGCAAGCAGCCAAGGATGGGGTCTCCACCACCT380.1970954356846473No Hit
GTTTAATGAAGTCTGAAAGGTAAGCGCCATCGTGGTCAGAGATACGGAGG350.18153526970954356No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT300.15560165975103735No Hit
GGTTTACTGAGAGCATTAGGGGCAACAAGGGAGCCCTGGGCATCTGGGGA300.15560165975103735No Hit
GTACATGGGCTGGGATTGATGGGAAGGGACAGATGTAGTTGGCAACCATG280.14522821576763487No Hit
GTACATGGGAGTCTCGCGCCTGCAGCCCGTGCCGCCCCAGCCGCTGCCGC240.12448132780082986No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA230.11929460580912864No Hit
CTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCCCATTTGTG220.1141078838174274No Hit
GCCCAAGTGTCCCAAGTGCAACAAGGAGGTGTACTTCGCCGAGAGGGTGA220.1141078838174274No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT220.1141078838174274No Hit
CCCCTCGACCGCTCGCGTCGCATTTGGCCGCCTCCCTACCGCTCCAAGCC210.10892116182572614No Hit
GTACTACAGAGACCGGCTGCCCGTGTGCCCGGCAGGTGGAGCCGCCCGCA210.10892116182572614No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAA210.10892116182572614No Hit
GTACATGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA210.10892116182572614No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)