FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003621284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACAACCTCGCCGCCCTCGGCGATCTGGGCATCGACGTCGTCGGCAT317.647058823529413No Hit
ATCCGATCCCGTCCCGGCCGTAACCGGTCCACTGACTGAGCGGAGTCCGC211.76470588235294No Hit
CAGAGACGACTCAGGGAATTCGCTCAGATCAAGCGATACCAGCTCTCCCA15.88235294117647No Hit
AAGATCACCAGAAGCCGCGAGAGGTTGGTGTCATCCAGGGCCGCCTCGAC15.88235294117647No Hit
CTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGA15.88235294117647No Hit
GCATCGAGGTCACCGGTGAAACCACGGGACCTGGCATCCATCACCACCGC15.88235294117647No Hit
CGTCGGGGAGGACCTCCAGCGGGGCCGGGTCTACCTGCCGCAGGACGACC15.88235294117647No Hit
CCCCAGCTCCGACGTCACGTCCCCACCCCGGCGCCTCCAGCCCTAGAGCG15.88235294117647No Hit
CACCATTGTTGACTGTGTCAATGCCTGTAGCCATAGCCCTACCGACGAGT15.88235294117647No Hit
GGCCTGTCGGCCCGCGGGTGCTCCAGGGGCCTCAGCCCTTGGGGGCGAAG15.88235294117647No Hit
GTCGATTACCGCGACACCAATTTCCGCCTCCGCGGGTTCACCTTCTATAA15.88235294117647No Hit
ACCTGAGGTTGTGAGCCTGAAGGGGATCTGGGTCGATCATTTCTCTCATG15.88235294117647No Hit
TCTTTGCCCTTGCCCGCTGGTCTGTGGTGGCCATGGCCAAGCGTTTCGAT15.88235294117647No Hit
AGGTCGCGAGTCGCCGCGACCAGCGCGTCGTGCAGGGCGCTGTCGGCCGG15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)