FastQCFastQC Report
Tue 10 May 2022
EGAF00003621290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences284923
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATAATACAGCACATAAAAGAGATTACATTAAGAGAAGAGACAGGAACT7600.26673873292082423No Hit
GCTAAGAGGTATTTATTCAGTTGCTGGCACCTCTCCCAGTGTAAATCTGG6710.23550222340772772No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA5380.18882294514658346No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA5020.17618795253454442No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA4390.1540767154634761No Hit
TCTTTATCCAGTGTACAAAGCTTGAGACTTTGGTGCAGGCTCGTGGAGGC4090.14354755495344357No Hit
GTATTTATTCAGTTGCTGGCACCTCTCCCAGTGTAAATCTGGACTTGGCT3730.13091256234140453No Hit
GTCGTAATAATGGCGTAAGTCAGATTCGCACTTTCGATCTTCCTGCACTG3490.1224892339333785No Hit
GTACATGGGAGCTCCAACCAGGGCAGCCTTCCTGAGAAGATGCAACCAAT3380.11862854174636657No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT3320.11652270964436005No Hit
TTCTTACACCGCGAGGAAGCTTCCTCGCAACTTTGTGGTAGATTACTATG3240.11371493350835138No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT3220.11301298947434921No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG3150.11055618535534162No Hit
GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT3030.1063445211513286No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG2980.10458966106632317No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA2940.10318577299831884No Hit
TCCCCATAGGGGACACTTATCCTTTGGCTAAACTAATATAAATAATGGAA2930.10283480098131775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)