FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003621376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4266
Sequences flagged as poor quality0
Sequence length140
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGT260.6094702297233943No Hit
TCGCCACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCC200.46882325363338023No Hit
GTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCCCCTGGCAC180.42194092827004215No Hit
TCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAGCTGCA180.42194092827004215No Hit
CACTAGAAAAGTCCACAACTTCCAGGCCAAGCCCGCAGTGCCTACGTCTA170.39849976558837313No Hit
CCTGGTTACCACTGCCACCTTCTCCATCGGCTCCACTGGCCTCGTGGTGT140.32817627754336615No Hit
GCATAGCACCTGCAGCAAGATGGATGTGGGCAGCAAAGAGGTCCTGATGG130.30473511486169713No Hit
GGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCT120.2812939521800281No Hit
TTTCTAGTGAGAGCCTCAAGACTGGGGATGCTCTCTGGAGCTATCTTCAT120.2812939521800281No Hit
CCTACAAGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCA120.2812939521800281No Hit
GCCTACGTCTAAGCTGGGCCAGGCAGAGGGGCGAGATGCAGGCTCAGCAC120.2812939521800281No Hit
GTCATACACCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAA120.2812939521800281No Hit
CTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCAGGGGCTGGCTTGT120.2812939521800281No Hit
CTCCGGAGGGGACCCGGCCTTCCTGGGCATGGCCGTGAGCACCCTGTGTG120.2812939521800281No Hit
GTCCTAGATGTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCA110.2578527894983591No Hit
GCTTTATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTG110.2578527894983591No Hit
GCTCATGGGTCTCCACATGAGCCAGAAACACACGGAGATGGTTCTGGAGA110.2578527894983591No Hit
GCAAAAGACCCTTTGCCCGGGGCGTTTCCTTTCCCGTTGGGGCTTCCACT110.2578527894983591No Hit
GTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCT100.23441162681669012No Hit
GAGATGGTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCAACGCCT100.23441162681669012No Hit
GCTTAGACGTAGGCACTGCGGGCTTGGCCTGGAAGTTGTGGACTTTTCTA100.23441162681669012No Hit
CTGCTACATCATGAAGATAGCTCCAGAGAGCATCCCCAGTCTTGAGGCTC100.23441162681669012No Hit
GTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGCCTCCGGTGAGCAGG100.23441162681669012No Hit
GTGCTGAGCCTGCATCTCGCCCCTCTGCCTGGCCCAGCTTAGACGTAGGC100.23441162681669012No Hit
CCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGC90.21097046413502107No Hit
CCTCCGGAGGGTGCTGAGCCTGCATCTCGCCCCTCTGCCTGGCCCAGCTT90.21097046413502107No Hit
CCTCTGCCCACTCCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTG90.21097046413502107No Hit
GCTTTATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCACCACCTCTG90.21097046413502107No Hit
GTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAGCTGC90.21097046413502107No Hit
ACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGCAC80.1875293014533521No Hit
GCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACTCCGCAGCTCCCCGG80.1875293014533521No Hit
GCTCCAGAGAGCATCCCCAGTCTTGAGGCTCTCACTAGAAAAGTCCACAA80.1875293014533521No Hit
GTGAGCACCCTGTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGCCTC80.1875293014533521No Hit
CTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCT80.1875293014533521No Hit
AGATGTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCATGCCC80.1875293014533521No Hit
GAGGAGAGCATAGCACCTGCAGCAAGATGGATGTGGGCAGCAAAGAGGTC80.1875293014533521No Hit
CCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGCACCTGAAACGCCT80.1875293014533521No Hit
GTTGTGGACTTTTCTAGTGAGAGCCTCAAGACTGGGGATGCTCTCTGGAG80.1875293014533521No Hit
CCCCTGGGCACCACCTCTGCCCACTCCCATCCTCTCCCCAAGCTCCCATT80.1875293014533521No Hit
GGGGATGCTCTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCAGGGG70.16408813877168307No Hit
GAGGAGAGGAGAGCATAGCACCTGCAGCAAGATGGATGTGGGCAGCAAAG70.16408813877168307No Hit
GCCCAGTGCACCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGGTCCTC70.16408813877168307No Hit
CCCCAATGCTCATCTCCAGAACCATCTCCGTGTGTTTCTGGCTCATGTGG70.16408813877168307No Hit
GTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAGCTGCAAAAGACCC70.16408813877168307No Hit
ATCTTCATGATGTAGCAGCAGGTGCCAGGGGCTGGCTTGTAGGCGATCAG70.16408813877168307No Hit
CACTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCC70.16408813877168307No Hit
GCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATCTCGCC70.16408813877168307No Hit
GTCCTGATGGAGAGCCCGCCGGACTACTCCGCAGCTCCCCGGGGCCGATT70.16408813877168307No Hit
CTGCTGCCCAGTGCACCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGG70.16408813877168307No Hit
GCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGCATCCC70.16408813877168307No Hit
TCCACTGACCCTGCTCACCGGAGGCGTCCTAGATGTAGTAGAGCGGCACC70.16408813877168307No Hit
CTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCCAG60.14064697609001406No Hit
CGTAGGCACTGCGGGCTTGGCCTGGAAGTTGTGGACTTTTCTAGTGAGAG60.14064697609001406No Hit
CACCGGAGGCGTCCTAGATGTAGTAGAGCGGCACCTCGCCACACAGGGTG60.14064697609001406No Hit
CAGCAAGATGGATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCGCCGG60.14064697609001406No Hit
AGATGGATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTAC60.14064697609001406No Hit
TTCTTATCGTGGTGGTGGTGGTGGTCCTCATCGTCGTGGTGATTGTGGGA60.14064697609001406No Hit
TCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGAGCCAG60.14064697609001406No Hit
CTACAAGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAG60.14064697609001406No Hit
CAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTCAGG60.14064697609001406No Hit
TTTCTGGCTCATGTGGAGACCCATGAGCAGGGCTCCCACAATCACCACGA60.14064697609001406No Hit
GCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCTGAGTGAGCACCTG60.14064697609001406No Hit
CCACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGA60.14064697609001406No Hit
ATGTAGCAGCAGGTGCCAGGGGCTGGCTTGTAGGCGATCAGCAGCTGCTG60.14064697609001406No Hit
CCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGTGT60.14064697609001406No Hit
GTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCCTGCG60.14064697609001406No Hit
CTTCTCCATCGGCTCCACTGGCCTCGTGGTGTATGACTACCAGCAGCTGC60.14064697609001406No Hit
CATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCC60.14064697609001406No Hit
GTGCTCACTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCA60.14064697609001406No Hit
GGCTTGTAGGCGATCAGCAGCTGCTGGTAGTCATACACCACGAGGCCAGT60.14064697609001406No Hit
GGTCTCCACATGAGCCAGAAACACACGGAGATGGTTCTGGAGATGAGCAT60.14064697609001406No Hit
GGCCCTGAGTGAGCACCTGGTTACCACTGCCACCTTCTCCATCGGCTCCA60.14064697609001406No Hit
GGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCCAGAACC60.14064697609001406No Hit
GGGATGCTCTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCAGGGGC60.14064697609001406No Hit
AGCCAGAAACACACGGAGATGGTTCTGGAGATGAGCATTGGGGCGCCGGA60.14064697609001406No Hit
CCTCAAGACTGGGGATGCTCTCTGGAGCTATCTTCATGATGTAGCAGCAG50.11720581340834506No Hit
CTCCAGAACCATCTCCGTGTGTTTCTGGCTCATGTGGAGACCCATGAGCA50.11720581340834506No Hit
TAGTCATACACCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGT50.11720581340834506No Hit
GCCCGTTGCGGCCCCTGAGGAAGCGAGGAGGCGTCGGCGTCGGCTGAGGC50.11720581340834506No Hit
GCCTCGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCC50.11720581340834506No Hit
CTCCAGAGAGCATCCCCAGTCTTGAGGCTCTCACTAGAAAAGTCCACAAC50.11720581340834506No Hit
GTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGCCTCCGGGTCAGTGG50.11720581340834506No Hit
GGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAGCTGCAAAAGACCCTTTGC50.11720581340834506No Hit
CATCTCGCCCCTCTGCCTGGCCCAGCTTAGACGTAGGCACTGCGGGCTTG50.11720581340834506No Hit
GCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGC50.11720581340834506No Hit
GGACTACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAG50.11720581340834506No Hit
AAGCTGGGCCAGGCAGAGGGGCGAGATGCAGGCTCAGCACCCTCCGGAGG50.11720581340834506No Hit
GTCCTCATCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACAT50.11720581340834506No Hit
GCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGCACCTGAAACG50.11720581340834506No Hit
ATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTCAGGGCCAGGCGTTG50.11720581340834506No Hit
GCCGTGAGCACCCTGTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGC50.11720581340834506No Hit
GTATCAACGCAGAGTACATGGGAGGAGAGGAGAGCATAGCACCTGCAGCA50.11720581340834506No Hit
AGCCCGCAGTGCCTACGTCTAAGCTGGGCCAGGCAGAGGGGCGAGATGCA50.11720581340834506No Hit
GTAGTAGAGCGGCACCTCGCCACACAGGGTGCTCACGGCCATGCCCAGGA50.11720581340834506No Hit
GTCTTTTGCAGCTTTTGCAGACGGGCAAGAAGCTGCTTCTGCCCACACCG50.11720581340834506No Hit
GTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTCAGGGC50.11720581340834506No Hit
GCCCAGTGCCTTAGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTG50.11720581340834506No Hit
CGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCCCCTG50.11720581340834506No Hit
ATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTGCCCAC50.11720581340834506No Hit
TACACCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAG50.11720581340834506No Hit
GTGCACCTGAAACGCCTTCTTATCGTGGTGGTGGTGGTGGTCCTCATCGT50.11720581340834506No Hit
TCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTC50.11720581340834506No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)