FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003621440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2342
Sequences flagged as poor quality0
Sequence length140
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGC90.3842869342442357No Hit
ATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAA60.25619128949615716No Hit
GAGCGGGGCTGTCCCAGCATCAGGCGCAGCAGCTGCACTTGTCCGACGCC50.2134927412467976No Hit
CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCC50.2134927412467976No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.2134927412467976No Hit
ATACAAACGCAGGGAAATCAACATGGTTCAACCGCCTGACGAGTGCTGAC40.1707941929974381No Hit
CTCCTGCACCTGCGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACCT40.1707941929974381No Hit
GTATCAACGCAGAGTACATGGGACGCCTCCTCCAAGTCCCAGCGAACCCG40.1707941929974381No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG40.1707941929974381No Hit
GATAAATGCACGCATCCCCCCCGCGAAGGGGGTCAGCGCCCGTCGGCATG40.1707941929974381No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA40.1707941929974381No Hit
ACCCAATGGAGCCCAGGATGAACTTGGTCAATCCGGAGAGTCCAGTTGCT40.1707941929974381No Hit
CACTCATGCACAATGGTTACCTTCTATCCAGGCTCCACACAGCAGCCAGA30.12809564474807858No Hit
GGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGAGGTGCATTTGCACTCTTT30.12809564474807858No Hit
GCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGAGGAGCC30.12809564474807858No Hit
CTGAGCAGCCGGCGCAAAATCCTCATTCTCCTCATCCATGTGACCTTCTC30.12809564474807858No Hit
CCCCACGGCTATGGGGAAATTAGCCCGAGGCTTAGCTTTCATTATCACTG30.12809564474807858No Hit
TCTCAAACTTGTACTTGCAGTCGGCTCCAAACTCCTTCTTCCAGTTGCAG30.12809564474807858No Hit
GTTCCTCATCCGCCTCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTC30.12809564474807858No Hit
CCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGGGC30.12809564474807858No Hit
GGAATAGATTCTCTTCTCCGAAAGATTTATGAGATCTACTCAGACTTTGC30.12809564474807858No Hit
CAGTATTCCAGTTACTGAACTTTCAGCAAGTGGACCTTTTGAAAGTCATG30.12809564474807858No Hit
GTACATGGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA30.12809564474807858No Hit
TCCTTGGGGAGTGATGCTGGGGAAAGGGAAGAGAGTGGCTCAGCCTGCAG30.12809564474807858No Hit
GTGCTAGATGGCGCCTGGAAGGGGGGTCACCCAAGTCTCCCTGCTGTCAT30.12809564474807858No Hit
GCCTGATGCTGGGACAGCCCCGCTCCCAGATGTAAAGAACGCGACTTCCA30.12809564474807858No Hit
CTCCAAGTCCCAGCGAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCT30.12809564474807858No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC30.12809564474807858No Hit
TGCTTGTGGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATT30.12809564474807858No Hit
GAACACATCCAAGCTTAAGACGGTGAGGTCAGCTTCACATTCTCAGGAAC30.12809564474807858No Hit
GTACCAGACGGTGAAGGCCCTAGCTGAGCGCAAGGCCCAAGGTGTGCTGG30.12809564474807858No Hit
GAATGGTGCCATCAAACCGCGGCGTCTTTCGAGCGGGTGCCGAGACCCAA30.12809564474807858No Hit
GTACTGTGGCGCTCCGTGAAATTAGACGTTATCAGAAGTCCACTGAACTT30.12809564474807858No Hit
ACGCAGAGTACATGGGGACTCCATCTTCGCGGTAGCTGGGACCGCCGTTC30.12809564474807858No Hit
AGGCTGGAGTGCGGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTCCC30.12809564474807858No Hit
CCTCTGATCAGTCCCAGCCTGATTCCCGTTCCCTGATGCCTCACCTTCTT30.12809564474807858No Hit
AAGGTGCTCTGCCATGCCCTGCTCCATGTTGAGGTCCATGCCACCATCCA30.12809564474807858No Hit
ATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGCATTT30.12809564474807858No Hit
TCCCTGTTGCTGTCCAAGTTGCTCATCAGCTTCTGGAAAGCAGCTTCATC30.12809564474807858No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC30.12809564474807858No Hit
CCATCACCTTCTTCTTCCTCCTCCTCTTCCTCCCCACCTTCTTCCTCTTC30.12809564474807858No Hit
CCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTCAGCCCTTGAGGGCTT30.12809564474807858No Hit
GTCAGAGGCCTGGTTAGCAGTCTTGTCGATGGTTTCCTGGGTGGTCTTGG30.12809564474807858No Hit
TCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTTCCTCGGG30.12809564474807858No Hit
GTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAA30.12809564474807858No Hit
GACTCAGAGAGGACCCCCAGAGGGTGTCTCCATCTTCCCTATTTATTTTC30.12809564474807858No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG30.12809564474807858No Hit
GTATTTGCCTGAGTAAAGAGCTCTCCAAAAATGTCCTCTGCATATTTACT30.12809564474807858No Hit
ACTTATATTAGCGGTAACGGTGGAGCTGGAGAGTATTGCGCCTTCTCCAA30.12809564474807858No Hit
CACAAGAAGAAACGCCTGGTGCAGAGCCCCAATTCCTACTTCATGGATGT30.12809564474807858No Hit
GACGTCCACCGTGATCCACATCCGCAGCGAGACCTCCGTGCCCGACCATG30.12809564474807858No Hit
CCTCTTCAGCTCGCCATGGATCCCAACTGCTCCTGCGCCGCCGGTGACTC30.12809564474807858No Hit
GTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT30.12809564474807858No Hit
CACTTGGCACAGCCCACAGGGCAGCAGGAGCAGCAGCTTTTCTTGCAGGA30.12809564474807858No Hit
TCCCTGGAGTGTGGCTGAGGAGGCCTCCATCTCATGTATCATCTGGATAG30.12809564474807858No Hit
GTGTGTTTGTGAAGCTGTGGGACCGTCACCGCCACCCTGAGTGTTATGTG30.12809564474807858No Hit
CCCCCCGGCCGGGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGAT30.12809564474807858No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCC30.12809564474807858No Hit
CTCTTACCCGGTAAGTAAACAGTCAGAAAATTAGCATGAAAGCAGTTTAG30.12809564474807858No Hit
GGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT30.12809564474807858No Hit
GGGCTGCATCTGCAAAGGGGCGTCGGACAAGTGCAGCTGCTGCGCCTGAT30.12809564474807858No Hit
CTACCAAGGATGGCACCTTAGAAAACAACTCTAAGATCATCTTCTGGCAA30.12809564474807858No Hit
CATCGGATCACCGGCGTGCCCCACCATGTCAGACGCAGCCGTAGACACCA30.12809564474807858No Hit
GATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGG30.12809564474807858No Hit
GTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGG30.12809564474807858No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)