FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003621467

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621467
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACTGGGCGGGGACGACGCGGGTTTCGGCGACCATTCGGCGCATC215.384615384615385No Hit
CTTGAGCGCCGCGGCCAACTGCGCCAGGTCGAAGGTCAGCAGCTCGGGGT215.384615384615385No Hit
TTCCCAGCAGGCGCGGGCAGCATTTTCGGCGCTCGTACCCCTGCCGAGCC17.6923076923076925No Hit
TCCGTAGCGGAGGCGGCGGACATCATAATCAGTGAGACTGACCTTCCCGC17.6923076923076925No Hit
GGTCTACACAGGTCACTGACTCGGCCCATTAAACCACGGAAGATTGGTTT17.6923076923076925No Hit
ACCCGAAGATGCTCGGCAACCAGCTCGCCGTACTCTACGAGGGGGCGGCT17.6923076923076925No Hit
GTTCCAGGTCACGACCGACACCCTGTCGGAACATTACCGGGAGCTGGTGG17.6923076923076925No Hit
GATCTTGCCATGCTGCGCGCGCCACCGAGAATGGATTCACCCCCGGATGC17.6923076923076925No Hit
ATATGAAGGGCGTGAAAAAGTTCGAATCGAACTTGAAGCGCCTTGAAGAC17.6923076923076925No Hit
CGACTCGCCAATCTTCGATCTCGCGCAGCTTGCCTTCGGCGCGACCGCCT17.6923076923076925No Hit
GCCGTGTAGCGCAACATGAAGCTAGAATGCGCCGTCGCGGCGGGTCAGCG17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)