FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003621498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGCGCAGCCGGGCGACCAGCTCGGCCAGGTGGAACGGCTTCACCAGGTA27.4074074074074066No Hit
ATTCTTGGCAAATGCTTTCGCTCTGGTCCGTCTTGCGCCGGTCCAAGAAT27.4074074074074066No Hit
CTCCCAATACAGATGACCCCACATTCCTACATGGCTTCTTTTCAACCAAC27.4074074074074066No Hit
ATATCACTGCACTGATCACCGAGGTGATGCAACTCTTGTCTGGGATCTGC27.4074074074074066No Hit
GGATGGGCCACCAGCGTGCCGACGAGGTGGCCGACCCGGTGTACCGCGCC27.4074074074074066No Hit
GGTATCAACGCAGAGTACATGGGGCGTAAGCCTGCAGCTCCTTCTTCGAC27.4074074074074066No Hit
GAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTC27.4074074074074066No Hit
GAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCACCCGGC27.4074074074074066No Hit
CTTCAGCATCCCAAATTTATCCCTCTCCTGGAATCCCAAACATCACAGTT13.7037037037037033No Hit
TAACGTGATAATTACCATCTTAACCTTGTTGAAATGTACAGTTCAGTTGT13.7037037037037033No Hit
AAGTATCTTAGTTTAAAGGGTAAGAGAGAAGTTGTTTCTGGTTTTTCCTT13.7037037037037033No Hit
TATGTATACTTAGTGAATTCATTCTTGATCATCATAATGGGCAATGACTC13.7037037037037033No Hit
ATTTTATCTCCTCTCTTGTCCATAAGAGCATAAAGGGTCTTTACAATAGG13.7037037037037033No Hit
AGTTTCTCCTGCTTTGAAGAAGCTGTATAATTAGGTCACACTAAACAGTT13.7037037037037033No Hit
GTGAGAACATGTGGTATTAGGTTTTCTATTCTTGCGTTAGTTTGCTAGTT13.7037037037037033No Hit
ATCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTG13.7037037037037033No Hit
GCCTTCGTGCTCTATCCGCTCGATGCGGGCACGCTGTACGTCAACTTCGG13.7037037037037033No Hit
AAGCTCGCTTGATCTTGATTTTCAGTACGAATACAGACCGTGAAAGCGGG13.7037037037037033No Hit
ATATCGACCCATGCCTCCAGCACTAGCCGATATGTCCACATATTCGGGCC13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)