FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003621919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003621919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length140
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAATGAAGAAGGTGTAGCTCTCGGCGGGGATGTTACCCTTGGCCAGGAA39.090909090909092No Hit
AACTTAATGGACGGGAGGTATCCCAATAGGAGGTTTCCTCCTATGGTTTT39.090909090909092No Hit
CCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCG26.0606060606060606No Hit
CGACTGGCTCGACGGCGAACTGATCGGCAGCGCGCTGCGCGGCCTGGCGC26.0606060606060606No Hit
GACTTGCGCCTCGGCCAGCATGTGGGCGATGGCCTGCGTATCGGTCACGT26.0606060606060606No Hit
TCTAAGGATTCAGCGAACTCTTCAGCCAGCCAACGCGGCGCAATAGCGAC13.0303030303030303No Hit
GTGCTATGGAATAATTTGCAGTGTTCCACAAGTCCTTCCTGATCAAAGTT13.0303030303030303No Hit
CGCCGAAAGCGGCCGCGCCGGCCGGCGGCGGTGGTGGACTTGACCTCCTG13.0303030303030303No Hit
AACTNAAGAGAACAATATAAAAACAAAGATTAATTTCTGAGAAGCCCCAA13.0303030303030303No Hit
CATAGGAATTCGCCGGACTTGAGGTCCAGCGGACCGCGCGGCGCGTCCTG13.0303030303030303No Hit
GTGCATGGTAAATATAGAAATGTGTCCAGTCAGTAGTAGCCACGTGGACG13.0303030303030303No Hit
GGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGAGTT13.0303030303030303No Hit
CACAAGACACACACGCACACTTGCAAACACGCCACACGACACATATGCCT13.0303030303030303No Hit
GAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACC13.0303030303030303No Hit
TTCTAGTGCCTTCTAGAAAAGGGTGCAGGTTCGCAGCCCTGTCAACCAGC13.0303030303030303No Hit
GTACCAAGTTCTGCTCCCCTCTGCAATATATAAAAATTCTTACTGCTCTT13.0303030303030303No Hit
CCTCTGACTCGCTCAGCTCACCCACGCTGCTGGCCCTGTGAGGGGGCAGG13.0303030303030303No Hit
GGACAAGCTGGGGCATCTTGATGGGCAGCCGTGAGGGGTCCAGAGAGAAC13.0303030303030303No Hit
TATCAACGCAGAGTACATGGGATACATGAGCCAATGAAATATTTTGAGCT13.0303030303030303No Hit
GCCCACGACGCCGTCTTCGGCCAGCAGGCCGGAGACCACGCTGCCATTGC13.0303030303030303No Hit
ATACTGCAGCACTTTAAAGGACGGTGTCTTTTTCTTTCTGGACAGCTGAG13.0303030303030303No Hit
GTCGATGACCAGGGGGAAGTAGTCGTCAAGCACTTGGTTGCACTGGGGCA13.0303030303030303No Hit
GCTTCGTGTCGGCACGAAGTGTCTTCCGATGCAGTGTCCAGTCATGACCT13.0303030303030303No Hit
CTCATGAGGAGATTGCCATGGCGACCGTCACAGCGCTGCGCCGCACAGTG13.0303030303030303No Hit
TTGCACGGAAGTGAGACCGCCGCGCGGACCGGGGGACAAGCGACAGCGCC13.0303030303030303No Hit
ATACGAATGCCCCCGGCCGTCCCTCTTAATCATGGCCTCAGTTCCGAAAA13.0303030303030303No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)