FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003624262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGTCCTTCCCTCAGTGACTCCCTTGGCAACCCTCATCTGCACACTG35.357142857142857No Hit
GAAAACTATCATATGTAGACGATCTTGAAGGGTCTTTCCGGCTCTGACAG23.571428571428571No Hit
GTAAGCTGTGGCAAGCACAGCCTCGCTGTAGGAACAGTTAGAAAGAGGGT23.571428571428571No Hit
GGGACGGGCGGTGGCTCGCCTCGCGGCGGACCGCCCGCCCGCTCCCAAGA23.571428571428571No Hit
GTAATTATTAATAATTTTCATTAAATGCCATAGGGACCAGAAATTAACCT23.571428571428571No Hit
GACTGGGATTGTATTATGCTACTTTCTCTGTTAAGTGCTGCACATAGCAC23.571428571428571No Hit
CAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGA23.571428571428571No Hit
ACCGAGGCTCCGCGGCGCTGCCGTATCGTTCCGCCTGGGCGGGATTCTGA11.7857142857142856No Hit
GTATTCACAGTGTCGTTTAATTCTCATTACAGAATTAAATCTAGAAATCT11.7857142857142856No Hit
GGGGGACAATGCCTGGCCTAGACCCAGGACTTCAGGGAGCCTGGGGAGCT11.7857142857142856No Hit
CCACCACTAATTTCCCATCTTTCAATTTTCTAGTTATTTTTCTTTCCTTC11.7857142857142856No Hit
GTGGCGGCTCCCGTGGTGATCGAGCCGGTGGTGGACGTGCACCTGCCGCC11.7857142857142856No Hit
ATCCTGGCCACCCGAAGTGTCCGTGTTTCACCTTCCGGAGCCAGCGGCTG11.7857142857142856No Hit
GCCGTTCGCCGAGCATGGCGAGATCCGTCACGGCGCGCAGCGATCGGCCG11.7857142857142856No Hit
CTCCTAAAAATACAAAAATTAGTTGAGTGTAGTGGCACACGCCTGTAATC11.7857142857142856No Hit
GCCTATGGCCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACC11.7857142857142856No Hit
GTCTCACAATACACTGTCTGTAAGCTGGAGAACCAGGGAGCCTGGTGGTG11.7857142857142856No Hit
GTAAATGCCCCTTATTTATTTATGGGGTTGAGTTGGCAAGATGTGAGTTA11.7857142857142856No Hit
CCCGGTGTGCCTGGTCCAGCTGGAAGAGAAGGTCCCCTGGGGAAGCAGGG11.7857142857142856No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTGTGACGGA11.7857142857142856No Hit
CATTGAAAGGAATTGAATGGAATCGTCATCGAATGAATTGAATGCAATCA11.7857142857142856No Hit
GTGCTAAATGGTGATCGATCAGGGTCCAAGCGGTAACGAGCGTACGTTCA11.7857142857142856No Hit
ATGAAATCATCATCGAATGGAATCGAATAGAATTATGGAATGAAATCCAG11.7857142857142856No Hit
TTGTAGATCACGCCGGTGTAGAAGTCGACGTTCGGGTACAGGCGCCGCTG11.7857142857142856No Hit
ACACATGCCCATGCAACACTTCAAGTCACGCTTGCACTGGCCATCCATCT11.7857142857142856No Hit
GGCGACGCGACAGGGTTGGGGCGCTGCGGCCGTGGGCGCGTTCGAGGCGC11.7857142857142856No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGC11.7857142857142856No Hit
GTGATCAGGCAACTGAAGAGCAGGTGCGGGCGATTATTCAGGTCCAGGCC11.7857142857142856No Hit
AAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCG11.7857142857142856No Hit
CGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGA11.7857142857142856No Hit
GCTGCAATTTTTGTAACCTGAAAGCAGTATTCTAGATGAAAACTGTGAGG11.7857142857142856No Hit
GTCCAAGAATTTCACCTCTAGCGGCGCAAGACGGACCAGAGCGAAAGCAT11.7857142857142856No Hit
CCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAA11.7857142857142856No Hit
CACGCCTGTAATCTCAACATTTTGGGAGACCAAGGTGAGTCAATAGCTTG11.7857142857142856No Hit
GCAAAACAAAAGAAAACTCTGTTCTTGGGAATCGGCCTCTGGCACATTCC11.7857142857142856No Hit
CCTCTTAAAACTCTGCAGACACCACAATGAAGTCATTTCCTATGACATGA11.7857142857142856No Hit
GAGCATGGCGGACCCCCAGAGCTGTTTTATGACGAGACAGAAGCCCGGAA11.7857142857142856No Hit
GTGTACAACAGCAAGCTCATGCTGTCCCCAAGTGCTTGCACATTCTAACA11.7857142857142856No Hit
CTCCTCAGCCAAGCACATACACCAAATGTCTGAACCTGCGGTTCCTCTCG11.7857142857142856No Hit
GCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGTA11.7857142857142856No Hit
GAATCATCCAGGGAGAAAGGGGGAGAGAATAGATTTTAAAATGCTTAAAA11.7857142857142856No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC11.7857142857142856No Hit
GTTCTCTGAGAACACAAAATCCTAATGTGTGGCAATTTTCATATCTGTGG11.7857142857142856No Hit
CAACATCTGTCTACTGCTTCTGATTTCATTAAATAAGTTACATTTAATAC11.7857142857142856No Hit
GAAGGTATTCTGAGAGCAGAGGGAATGGTCCGAAGTTGGAGATGGATTCG11.7857142857142856No Hit
CAGCCAGGTAATGGTTGGGGTTCATCAGCCCGCCGGAGCGGGTGACGATG11.7857142857142856No Hit
TCATGACACTGACCACGGCGCTGGAGCGCAACAATCCGCCCTTGCCGATT11.7857142857142856No Hit
CTTGGTGTTTTGTTTTGAGATGGAGTTTTGCTCTTGCCTAGGCTGGAGTG11.7857142857142856No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)