FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003624442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCACCCACACTGTGCCCATCTACGAGGGGTATGCCCTCCCCCATGCCAT19.090909090909092No Hit
ATTTATACCACAACACTGCAGCTTCTGTTCATATACAAAGAGCAGGATGG19.090909090909092No Hit
GTGTGGACAAGGGCCGAGATGACGAGCTATGAGCTGTGGAAGGGAATGGG19.090909090909092No Hit
ACCTAAGGTCTTCCCCCACCCTTTGGTCCTATTTTCCTATATTTTCTCTT19.090909090909092No Hit
GTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCA19.090909090909092No Hit
ACCCTGAAGATCCTCATCATCGGCGAGAGTGGGGTGGGCAAGTCCAGCCT19.090909090909092No Hit
GGTTTTATTTATATGGCTCGAAATTTACAGTTTTCTTACTGCATCATCAA19.090909090909092No Hit
TTTGCTTTCTTTTGGGATATGGAGATGCAGCAGCACAATGCAATGCTGTT19.090909090909092No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT19.090909090909092No Hit
AGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGTTGATCTTTGCTGGGA19.090909090909092No Hit
GCCCTGACCCAGACCTGGGCGGGCTCCCACTCCATGAGGTATTTCTTCAC19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)