FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003624445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGAC33.225806451612903No Hit
GTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGTCAAATTAAGCCG22.1505376344086025No Hit
GTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAA22.1505376344086025No Hit
AGGTGGCTCTTCCTCCACATCACGACTGGGGTCTCGAAGAGGACGGGGGT22.1505376344086025No Hit
CAGATTCCGCCCCATCGCGAACTGACGCCGCAAGCCAGGCTGATCGACCC22.1505376344086025No Hit
GACCCATCCAGGTCCTGCCTATAATGACCACTCAAACGGGTCATTATAAC22.1505376344086025No Hit
GTGGATCCGAGTGCTGTTTGGAGAAATCACACGTTTGTTGAACCACATCA22.1505376344086025No Hit
GTGAAGAAGAAGTCAAGAAAAACAAGCAAGAGAATGACAAGTTAAAGAAG22.1505376344086025No Hit
AATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGCATT22.1505376344086025No Hit
GTCTCGCTGTCGCCCAGGCTGGAGTGCAGGGGCACGATCTCGGCTCACTG22.1505376344086025No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA22.1505376344086025No Hit
GCATTAGGATTATAGGCGTGAGCCACTGCACCTGGCCAAGTAATTTCTTT11.0752688172043012No Hit
CTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC11.0752688172043012No Hit
CACCAGCAGCAAGTGTCCCAAAGAAGCTGTGATCTTCAAGACCATTGTGG11.0752688172043012No Hit
TAAATGTAGTCACAACAATAAAACTTCTTACACTAGGAATTTCTAGCTGT11.0752688172043012No Hit
CTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTGTGATGGT11.0752688172043012No Hit
GCTCAAGCCTGTAATCCCAGCATTCTGGGAGGCCGACGTGGGCAGATCCC11.0752688172043012No Hit
GTATCCGTTCAAGCCTCCCATGATCAAATTCACAACCAAGATCTACCACC11.0752688172043012No Hit
CCGCCGCCATGACTGAGCAGATGACCCTTCGTGGCACCCTCAAGGGCCAC11.0752688172043012No Hit
ACAATACACTTTTTCAGAGCCTAAATTAAAAATTGTGCTTACCTCTTACC11.0752688172043012No Hit
GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGC11.0752688172043012No Hit
ATTTGGCTTTACGTTTGACTATAATACTCAATCCAGAAGAAAAACAAGGT11.0752688172043012No Hit
ACCAACAAAATAGAACCGCGGTCCTATTCCATTATTCCTAGCTGCGGTAT11.0752688172043012No Hit
GCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATG11.0752688172043012No Hit
CTTCCATATTTCATCTTCATCAGCTACTTGCTGCTTGGAGGGAAAGGGGC11.0752688172043012No Hit
CTATTGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAG11.0752688172043012No Hit
GAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACG11.0752688172043012No Hit
GTTTAGTTTCTATTAAAAAAAATTAACTTAAGGCTGGCAACGGTGGTTCA11.0752688172043012No Hit
CTCTACAAGGTTTTTTCCTAGTGTCCAAAGAGCTGTTCCTCTTTGGACTA11.0752688172043012No Hit
ACCGTTTTCTGGGCACGGTAGAAAAAGAAGCCACTTTTTCCAATCCTAAA11.0752688172043012No Hit
AGCTTGCACCATTCGGTCTGGTCATTCTGGGCTTTCCCTGCAACCAATTT11.0752688172043012No Hit
ACGCAGAGTACATGGGGGACGCTGGGGCCGAGGGTAGCTTGAGCGCGGCG11.0752688172043012No Hit
TCCCAGTTTCCTCTGAAATAGACAGCATTCACCAGAACCAGCCTTGTCAA11.0752688172043012No Hit
GCCTCATGGACCCCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGTGT11.0752688172043012No Hit
CACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCA11.0752688172043012No Hit
GTATTATGGAACAGAAGAGACAATTTTAAATAATTTTTTTAAACAGACCA11.0752688172043012No Hit
TTATTATGATGAATATCTCAAGCAAGTGATTGATGTGCTGGAAACAGATA11.0752688172043012No Hit
GCATTGGAGTAATAGTTTGCTTCATTTCATCTGATGAATATGACTTTATT11.0752688172043012No Hit
CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGACCTGCTTTGAACAC11.0752688172043012No Hit
TTCTTGATTAATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTC11.0752688172043012No Hit
GACTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCATGCCACCACAACTG11.0752688172043012No Hit
CATCTTTGCTGTGGCTCACAGATTGTTCCTCCCATTCCCCTTGCCGCTTT11.0752688172043012No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC11.0752688172043012No Hit
CCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGG11.0752688172043012No Hit
CTATACAGGTGATATGCAGAAACCCCTACTGGGAAATCCATTTCATTAGT11.0752688172043012No Hit
GTACATGGGAGGCTGCCAAAGACAGGGTGCTATCGGGGCTATGACTGGTG11.0752688172043012No Hit
TAGCGGCGCAATACGAATGCCCCCGGCCGGCCCGCATAATCATGGCCTCA11.0752688172043012No Hit
GCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTT11.0752688172043012No Hit
CTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTGTGATGTT11.0752688172043012No Hit
GCCTCATCCCAAGTGGACCCCGGCAGCTGGGGGAAGCCAGGCAAGATCTG11.0752688172043012No Hit
CTCGGGGGTAGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG11.0752688172043012No Hit
TCATCAATGACTGTGGGTTCCAAGTCTACAAACACTGCCCGGGGCACATG11.0752688172043012No Hit
CCAGGTGCGCGTGTCGTCGCCGACGCCGGGGCGCTCGATCTTGACGACGT11.0752688172043012No Hit
GGTATCAACGCAGAGTACATGGGGTTTCTTGCTGCAGCAAAGCGAGTGGG11.0752688172043012No Hit
ACCCCAAGGAGTTGACATCTGTAGTTTAGAAACAAAAACAAATGGAGCTC11.0752688172043012No Hit
GTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACT11.0752688172043012No Hit
ATTCTAGGAGTTGATAAAAGGGCTAGGAAGTAGGAAGTTGGGAAGAAGGG11.0752688172043012No Hit
GGCGTACTGCTCGGGCGTGTTGCCGACCGGCTACACGCCGAAGTCGACCA11.0752688172043012No Hit
GCCCGAGGTTATCTAGAGTCACCAAATCCTCCGGCGCCCGCCCCCCGGCC11.0752688172043012No Hit
ACCACAAGCAGCACCCACCCCCTTCTCCCCCACCAGGGCTGTAGTGTGAG11.0752688172043012No Hit
CTTGGAAACAGAATTGTTCTACAAAGGTATCCGCCCTGCAATTAACGTTG11.0752688172043012No Hit
TTCTTGGACCGGCGCACGACGGACCAGAGCGAAAGCATTTGCCAAGAAAG11.0752688172043012No Hit
ATCCTGCAATTCCAATGAGAGCAGCCAATACAGAAGAAAGCATCGCACAT11.0752688172043012No Hit
GTCAAGAGGAAACAAGTATTCTTCGTTGTTGGAAATGTAGAAAATGTATA11.0752688172043012No Hit
CTTCTAGGAAATCCATATCAATCTCAAATGGAAAGATTTGGCTTCAAGCT11.0752688172043012No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCTGAGTGTC11.0752688172043012No Hit
TGCCAGTTCGTCGGTTCCGCGCACCACCATCCGCTCATCGAGGGCACCAG11.0752688172043012No Hit
ATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAACAT11.0752688172043012No Hit
GCCCGCCGCACGCCCGACGGGACATTTTCCTGATCGTCGCCGAACCCGGC11.0752688172043012No Hit
ACATCATCCAAGCCCCAGGAACAGCACATGACTCTTACAAGCACCGCAGC11.0752688172043012No Hit
GGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGGCCAGTTCCTGCTTCCC11.0752688172043012No Hit
CTCATAACTCGGTTGAGTTTTTCTCCTCTGCTGAGGAAACAGTACCGAAG11.0752688172043012No Hit
CCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTT11.0752688172043012No Hit
GTACAGAGGGAGAAGACAGGTGGGAAGGGACGAGAGGACACAAGCTAGGG11.0752688172043012No Hit
CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAAT11.0752688172043012No Hit
GTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAG11.0752688172043012No Hit
TAACAAGACGGCGCAGGTTGATGCTTCCAATAAACATGATCTTTCTGCTC11.0752688172043012No Hit
GCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCC11.0752688172043012No Hit
GTTTAGTTTCTATTAAAAAAAATTAACTTAAGGCTGGCCACGGTGGTTCA11.0752688172043012No Hit
GACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAA11.0752688172043012No Hit
AACTGACAAAGGGTAACGTGCCTCACACAGGAATGTGTTCGCATTTGCAA11.0752688172043012No Hit

[OK]Adapter Content

Adapter graph