FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003624446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCA33.225806451612903No Hit
ATCTCAACTACAACAAAGCTGAAAAATGGGGCAGCCTTAACAGTAAATGC22.1505376344086025No Hit
CTCAGACCACAGTGCAATCAAACGACAACTCAGGTTTAAGAAACTCACTC22.1505376344086025No Hit
GGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGA22.1505376344086025No Hit
GTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGC22.1505376344086025No Hit
GACCCGCCCAGGCCGACGGCGCCGGCGACGACGGCGAAATGGTCGTCCCA22.1505376344086025No Hit
CTATGAAGGTGAGGCAGCGGATACGAGGAGGCATCTTTCAGCCAGGGAAC22.1505376344086025No Hit
GTCCCTCTAAGAAGTTGGGGGACGCCAACCGCTCGGGGGTCGCGTAACTA22.1505376344086025No Hit
CCCCAGGAGGCATCTTGTTTAGACACTGTGCGATAATTCTCAGGGACTGG22.1505376344086025No Hit
GTACATGGGGTGTTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATC22.1505376344086025No Hit
GTCTCACTGTTGTCTCCTGGGCTGGATGGAGTGCAATGGCACAATCTCGG22.1505376344086025No Hit
CTGCCAGGGGTACAGAAGAGTTCTTTTGATTCTCCAACAATTGATGCAGT22.1505376344086025No Hit
GCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTGC22.1505376344086025No Hit
TTCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTC22.1505376344086025No Hit
CAGCGAGACAACACCGACTCAGATGACGATGAACAAACCGGCCGCAGCAC11.0752688172043012No Hit
CGGTATCAACAGGAACATCCTCGTGTTAGATATTGAGGCTGCTTCGTGTC11.0752688172043012No Hit
CAAGAACCATAACCAAACTCTCATTTGTGAAAGTGGACTCACACTTTCGA11.0752688172043012No Hit
GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT11.0752688172043012No Hit
CCTAAAACATCATAGCTTCATTGTTCCAGATGTAACAGGTTTGAAAGAGC11.0752688172043012No Hit
CCTGACAGTCCCGGTGACTGATGAGGCTTCAGAGACTCCACCACTCGCTA11.0752688172043012No Hit
GACTACAGGCGCGCGCCGCCACGCCCGGCTAATTTTTATATTTTTAGTAG11.0752688172043012No Hit
GGCTGAGAGGGAGCTGCTCATGGATCGGTCTGTGGGGCTCGAAAGGATGT11.0752688172043012No Hit
GCTGCACCTCGGACGGCTTCGCACCAGCCAGCGCCCTCTCTCTCCTGCAG11.0752688172043012No Hit
ATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAA11.0752688172043012No Hit
TCTTTCCTGAGACCCAGGAGGTTGCCACCATCAAGCTGCTGCGCCGTAGC11.0752688172043012No Hit
GTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGA11.0752688172043012No Hit
CCTTACACCCGCATAGATAACAGCCACTTGTTCTTCAATAGCCATGGGAG11.0752688172043012No Hit
GAGATATTGACTCCTTTAAATTTCTGCCTGTGTCCTATTTTAAAAGTGGC11.0752688172043012No Hit
CCTCTGCACCATTGTCTCAGAGTGGATTGGCTACTGCAAATGGGAAGCCA11.0752688172043012No Hit
AAAGAGAATAACAGTGAGGATCAAGGTTCAAAAGCCTCTGAAAACAACGA11.0752688172043012No Hit
ATTTAGGTTGTACAGATTGAAATTTAGTTGTTTCATTGGCTGTCTGAGGA11.0752688172043012No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTACTAGATTGTATT11.0752688172043012No Hit
CCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTG11.0752688172043012No Hit
TCTCCTGCGTCTCCGTTTTCTTCAGCTTGGCCTTATCGAAGCTGGCGATT11.0752688172043012No Hit
TAACAAACACGTATTTTTGTAAGTTTTAAAGGCAAAGGGGGCAGAATGAT11.0752688172043012No Hit
TCCCAGAGGCGCAGGGTTCCATCCCAGGAGCCTGAGAGGGCAAACTGGCC11.0752688172043012No Hit
GGTATAAGCAATGGATTTCTTCAAGTTATCAAAGATCAGACGACCTTCCT11.0752688172043012No Hit
CTGGGAAGTGTGCACGATGCATCGGACATTCTCTGGTGGGGCTCGTCCTC11.0752688172043012No Hit
GCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCTCCTCTCCTACTT11.0752688172043012No Hit
AGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCAT11.0752688172043012No Hit
GGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGAC11.0752688172043012No Hit
TTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTA11.0752688172043012No Hit
AATAAAACAGGGTGTCTGGGGAAAGCTAGGGGAAAATAAGTTAGCTGCAG11.0752688172043012No Hit
ATCCAACTTAGCTTTAATTAACATTCTTAACCTTCCTACTTCTTGCCTTT11.0752688172043012No Hit
CCCTAAACGGGCCCCACAGAAAGGACAATTCAGTTTTCCAACTGTCCACT11.0752688172043012No Hit
TGTCCGGGCCGGGTGAGGTTTCCCGTGTTGGTCAAATTAAGCCACAGGCT11.0752688172043012No Hit
GTGCCGTACCGCGGCGCGGCGCCCGCACAGTCCGACGTGGTCGGCGGGCA11.0752688172043012No Hit
GTTCCCAGAAGAGGCGGTCAGATGTACCCAGGAGCTCCGAGGTGGGAGGA11.0752688172043012No Hit
CACTGAGACCACGCTTTGATCCAGTTGGCCCACTTCCAGGACCTAACCCC11.0752688172043012No Hit
TGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTC11.0752688172043012No Hit
ACCCAACACCATCTTAATTGGCAGAGGTTCAGTGGGCTGGAGTTTTGTGC11.0752688172043012No Hit
AAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTT11.0752688172043012No Hit
AGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGCC11.0752688172043012No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA11.0752688172043012No Hit
TCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAG11.0752688172043012No Hit
AAGTAGATCCTTCCACATCCTTGGCTTGAAAAGCAATAGTCAGTTTCACC11.0752688172043012No Hit
ACCGGGGCCCCGGCCGGGCCGACCAGCGCCGAGCCCGAGCTGATCACCAC11.0752688172043012No Hit
ACATAAACGACTGCAAGAGTTCTCGGTCTCTGACATGAAAAAATTTTCGC11.0752688172043012No Hit
CATCTATATACTCCCACAAGGAAACTACATGTTTCTCTATCCCAAGAGGT11.0752688172043012No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA11.0752688172043012No Hit
GTCCGCCGCGAGGCGAGCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG11.0752688172043012No Hit
ACGCAGAGTACATGGGAGCCAGTCATGGACACCGTGATATTGTACAGAAG11.0752688172043012No Hit
CTTTAGGAGCGAGGTTCGGAGCCATCGCTGCTGCCTGCTGATCCGCGCCT11.0752688172043012No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCA11.0752688172043012No Hit
CCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGG11.0752688172043012No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT11.0752688172043012No Hit
GGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGA11.0752688172043012No Hit
TCAGTAGACAGCCAGCGGTAAGTGCGATGACGCCGCAGCACCTCAATGGC11.0752688172043012No Hit
ACTCTGTCTCAAAAAAAAAAAAAAAAGCAAGCATGCTGGCACACACCTGT11.0752688172043012No Hit
CTGCAGCGTCCTATCCTAAAGGCACGAGAAGACGGAAATGCAACCTGCGG11.0752688172043012No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC11.0752688172043012No Hit
CTTTTAGAGATTCCTGCCAAAAATTCTACCAAGCAGAGATGGAGGAGCTT11.0752688172043012No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA11.0752688172043012No Hit
TCTCGGCGCCCCCTCGATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAG11.0752688172043012No Hit
GCTATGCCGAGGATCCAGTGCACAGAGGGTCAGAACATGAGTTAGGAGGG11.0752688172043012No Hit
ACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAA11.0752688172043012No Hit
ACACTAGTAACAGTGAAAGCACAAGATTTCCAAATCAGTCGTTTTCTCAA11.0752688172043012No Hit
GGCCAGATGCCAAGTGACAAGACCAGTGGGGGAGGAAATGATTCCTTCAA11.0752688172043012No Hit

[OK]Adapter Content

Adapter graph