FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003624645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTACATCAGTAGCTGTCAGAGGGAAAGACTGTGCAGTAATTGTCACA15.88235294117647No Hit
CTCCAGATCATTCCTTTAGTTTAGAGCTGGGCAGTGAAGTGGATATCACT15.88235294117647No Hit
AGATGGTCCCAATAATGATGCCCACCAGACCCACAGTCAGGCCCAGGGCA15.88235294117647No Hit
ATTCAAAGTGATCATCATTGAGGCTTCTGTTAAAAGTTCTTCCAAAGTTG15.88235294117647No Hit
TTCAAGGACTTTGCCCCCCTTCCCTCCCCCTTGTAACACCTTCTAGAGTT15.88235294117647No Hit
GTACTTGTATTTTGAATGGTTTCCCACTTTCAAATGGGAAAACCGACTGT15.88235294117647No Hit
ACATGGGAGCGTGGGTTCCTCTCCTCCCTGCCCTTCTGCCCCCGTCAGAC15.88235294117647No Hit
CCCCTGAGCCTGAGGAGACCTGGGTAGTGGAGATGCTGTGTGGGCTCAAG15.88235294117647No Hit
GGGGGAAGCTGCGGCATTTGGAGGGCACAGGGGTAGCCAGAGCACAGGAT15.88235294117647No Hit
ATCCAGTAATTCCACTTCTGGCTAAATATCCAAAAGAATTTAAATATAGC15.88235294117647No Hit
GTATCAACGCAGAGTACATGGGAACTCGGTGGTGGCCACTGCGCAGACCA15.88235294117647No Hit
TCCTTGGGGAGTGATGCTGGGGAAAGGGAAGAGAGTGGCTCAGCCTGCAG15.88235294117647No Hit
CTCTCTGCCTCCGCCAAAATTTAATTAAATGCATTGAGAATCTGGAGGAG15.88235294117647No Hit
GAATGAGTTGACATCAAGTAGATTATTGAAGCTAGAGATGGAAAATCAAA15.88235294117647No Hit
GGATAACGAGGCTTATGTGCACGATGCACCTGTACGATCACTGAACTGCA15.88235294117647No Hit
TGACTGGTAAGACCATCACTCTCGAGGTGGAGCCGAGTGACACCATTGAG15.88235294117647No Hit
GTGTAGACGTCTCCACGCTGGGGAGTCATTTCCAGCATCACCAGGATCTG15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)