FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003624646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACTTCACCAACGGGACGGAGCGCGTGCGTCTTGTGACCAGATACATCT15.88235294117647No Hit
CTTCCTTATCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTCGGC15.88235294117647No Hit
TCTTAATGCAGGATCTCTGACAATGAGTGAAAAGCGGGAATTTCCTACAG15.88235294117647No Hit
TAAAGATCCAGCTCTCGAAGACTCTGTAGCTCCTCCAGATTCTCAATGCA15.88235294117647No Hit
GCTCTTCTCAGCTGACATACAGAGCACTAAATATTTTAAGGCAAGTCCAT15.88235294117647No Hit
ATCCTTCACTTGGTTAGGGTGGTATCTCAGGAAAGCCTGGAATTACTCAG15.88235294117647No Hit
CAAAGCGCTCCAACTATACTCCGATCACCAATGTACCTCCAGAGGTAACT15.88235294117647No Hit
GATTACAGGCATGAGCTACCACACCCGGCCTTCGTTTTTCTTTTGACACA15.88235294117647No Hit
CTTATATACCTGAGGGCCTTGCTCTTCATCTATACCAATTAAAATCATAC15.88235294117647No Hit
ACTTTAGATTTGCAAAAATGTTGTAAACAAGTTCTTGCCAAACCAATCCC15.88235294117647No Hit
GATCTACACTCTCCAGCTGTAGAGTGGGCTTATCATCTTTCAACACGCAG15.88235294117647No Hit
CCTTATAACCTGCCTTTGCCTGGGGGAGTGGTGCCTCGCATGCTGATAAC15.88235294117647No Hit
CTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGATTTTTCTCTTGCGTCT15.88235294117647No Hit
CTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGG15.88235294117647No Hit
ATCTGGGACCGCTGCCTTAAGGAAGACACTGTTTGATTCAGATGTTCATT15.88235294117647No Hit
CTACAGCACTCTATGTACAAGCACATTGACGCTCCTGACTATCCTCAACT15.88235294117647No Hit
CTCCCAGAGTGCTGGGTTTACAGGCGTGAGCCACCACTCTCGGCAAGATG15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)