FastQCFastQC Report
Tue 10 May 2022
EGAF00003624673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7991
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC150.18771117507195595No Hit
GTGTTCTTCTTTCAGATACAGTAGGATTTATTCAGGATCTTCCGACGACA110.13765486171943436No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT110.13765486171943436No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.12514078338130397No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG90.11262670504317357No Hit
GGTCTACATCGAGCACAAGACGCTGTGGGGCGCGCGCGGCGAGGTCGACG90.11262670504317357No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGATGCGTG90.11262670504317357No Hit
TCTTTAAAGGCTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTG90.11262670504317357No Hit
GTACATGGGCATGCGGGGCCCAGCGCGGAGCTGGCGGCCGACCAGGAACT90.11262670504317357No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATC90.11262670504317357No Hit
AATTTAAAGAGATGGTCGGGTTGGGCGCAGTGGCTCACGCCTCTAATCTC90.11262670504317357No Hit
GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT90.11262670504317357No Hit
GCCTTAAAGTGATCTTCCTGCCACAGCCTCCCAAAACGCTGGGATTACAG90.11262670504317357No Hit
TTCGTGCACAGCGCGACGAGCAGACGCTCTACAGCCTCAGTGCCAATGCC80.10011262670504316No Hit
CTTCATAGCTGTCAGCACTCGTCAGGCGGTTGAACCATGTTGATTTCCCT80.10011262670504316No Hit
TAGCAAAACCTTCTTTCTACTAAAAATGCAAAAATTAGTCAGGCCAAAAA80.10011262670504316No Hit
CAGTAGGATTTATTCAGGATCTTCCGACGACATTGATTGCTGCATTCCGC80.10011262670504316No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCTC80.10011262670504316No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAA80.10011262670504316No Hit
CGTTTATTGTAAGCCGTCAGCATCGGGGTATCATCTGCTTCAAGCTCCTC80.10011262670504316No Hit
GTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCG80.10011262670504316No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT80.10011262670504316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)